Chryseobacterium sp. StRB126: CHSO_4632
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Entry
CHSO_4632 CDS
T03602
Name
(GenBank) DNA topoisomerase i
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chz
Chryseobacterium sp. StRB126
Brite
KEGG Orthology (KO) [BR:
chz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chz03032
]
CHSO_4632
03400 DNA repair and recombination proteins [BR:
chz03400
]
CHSO_4632
Enzymes [BR:
chz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CHSO_4632
DNA replication proteins [BR:
chz03032
]
Prokaryotic type
DNA Topoisomerases
CHSO_4632
DNA repair and recombination proteins [BR:
chz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CHSO_4632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HTH_IclR
YqfQ
MarR
Peptidase_C92
Motif
Other DBs
NCBI-ProteinID:
BAP33669
UniProt:
A0A077KV62
LinkDB
All DBs
Position
complement(5268895..5271456)
Genome browser
AA seq
853 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGKDFEVKSSFGHIRDLPKKGMGIDLATFSPDYEVSADKK
KLVTELKAAVKKAEMVWLASDEDREGEAIAWHLADELKLKPENRKRIVFHEITKNAILKA
IENPRDIDQNLVNAQQARRVLDRIVGFEMSPVLWKKVKPGLSAGRVQSVAVRLIVEREKE
IREFVPKASFKLDGIFLNNTEQEIAAKLKKDFEKEVEAEKFLEQAKTTEFKVLNVETKPG
TRSASAPFTTSTMLQEASSRLGYNVTTTTRLAQRLYEEGFITYMRTDSVNLSQEAIDGAK
KQIVSEYGAGYSSPRNYTTKSASAQEAHEAIRPTDFAVKSIGDAQLNKLYQLIYRRTLAS
QMTNAKIEKTVIEIGNASLPHHFEAQGEVIIFDGFLKAYGIVKTEDDDEENSEKLLPKVS
VGEVLTYKTITAAEKFTRSSVRYTEAALIRKLEELGIGRPSTYPPTIQTIQNREYVDKRE
IEPNIRKVVKITLDKDKIKKEVLDEKFGGDKNKFIPTDIGEVVNDFLIDNFKEILDYGFT
ARVEESFDEIASGDQKWKEMMSDFYSKFHPRIEDVEENADRATGDRLLGVDPKTGKNIHA
RIGRFGAMIQIGETDDEEKPIFASLMSGQNIATITFEEALELFKLPFELSDFEGHAVSVG
VGRFGPYVKWGETFISIPKGEDPLSVDQKRAEEIINEKKKADAPIATYKGEPVTKGSGRF
GPFIKYKDIFINVPKKYNFDNLSQSDINELIDAKLEKEANRYIQQWEKEKISLENGRWGP
FIKFGKAMFKIPKKNDDTKYDAEELKETSLEEVKKWITDQDKNAFAEKKKPAAKKATTAK
KTTAAKKPAAKKK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaatttagtaatcgtagagtccccggctaaggcaaaaactattcagaaatat
ttaggtaaggattttgaagtgaaatccagtttcggacatatccgggatctccctaaaaaa
ggaatgggaatagatcttgccacctttagtcctgattacgaagtttcagcagacaaaaag
aaattggtgacagaattaaaggccgcagtaaagaaagcagaaatggtttggctggcttcc
gatgaagaccgcgagggagaagctattgcatggcacttagcagatgaattgaaactgaag
cctgaaaacagaaaaagaattgttttccacgagattactaaaaatgccattctaaaagcc
attgaaaaccccagagatatcgatcagaacttagtgaatgctcagcaggcaagaagagtg
ctggacagaatcgtaggttttgaaatgtctccggttttatggaaaaaagtaaaaccagga
ctatctgcaggaagagtgcagtcggtagccgtaagattaattgttgaaagagaaaaagaa
atccgtgaatttgtacccaaagcaagtttcaaacttgacggaattttcttaaacaataca
gagcaggaaattgctgccaaacttaaaaaagacttcgaaaaagaagttgaagcagaaaaa
ttccttgaacaggcaaaaactacagaatttaaagttctgaatgttgaaacaaaacctggt
acacggtctgcatctgcaccttttaccacttctacaatgttgcaggaagcttcatcgaga
ttaggatataatgtgacaacaaccactcgtttggctcagagactatacgaagaaggattc
attacctatatgagaactgactccgtaaacctttcccaggaagctatcgatggtgctaaa
aaacagattgtatcagaatacggagcaggatattcttctccaagaaattatactacaaag
tcagcttcagcacaggaagctcacgaagccatccgtcctacggatttcgcagtgaagagc
attggagatgcacagttgaataagctgtaccaattaatctatagaagaacattagcttcc
cagatgacgaatgctaaaattgaaaagactgtaattgagatcggaaatgcttcattacca
catcattttgaagcacagggagaagtaatcatttttgatggtttccttaaagcttatggt
attgtaaaaacagaagacgatgatgaagaaaacagcgaaaaattattacctaaagtaagt
gtcggagaagttttaacttataaaacaattacggctgctgaaaagttcacaaggtcaagc
gtaagatacacagaagctgctttgataagaaaacttgaggaattgggaattggacgtcct
tctacctatcctcctacaattcagacgattcagaatagagagtatgtagataagcgcgaa
atcgaaccgaatattcgtaaagttgttaaaattactttagataaagataaaataaaaaaa
gaagtccttgatgaaaagtttggaggtgataaaaataaattcatccctacggatattggt
gaagttgtcaatgactttttaattgacaacttcaaagaaattcttgattatggtttcacg
gcaagagtagaagaaagtttcgacgaaattgcaagcggagaccagaaatggaaagaaatg
atgagtgatttctactcaaaattccatccaagaattgaagatgtagaagaaaatgcagac
cgtgcaacaggggacaggcttctaggagtagatccgaagaccggtaaaaatattcatgcc
agaatcggaagatttggagcaatgatccagatcggagaaacagatgatgaagaaaaacca
atttttgcatcattaatgtctggtcagaatattgccaccattacttttgaagaagcgttg
gaattgtttaaattaccatttgaattgagcgattttgaaggacacgcagtttctgtggga
gtaggaagatttggaccttatgtaaaatggggagaaactttcatcagtattccaaaaggt
gaagatccactttctgtagatcaaaaacgtgcagaagagatcatcaacgaaaagaaaaaa
gcggatgctccaattgctacgtataaaggagaacctgtaaccaaaggatcaggaagattc
ggaccatttatcaaatacaaagatattttcataaatgttccgaagaaatataacttcgat
aatctttctcagagcgatatcaatgaactgattgatgctaagcttgaaaaagaagccaac
agatacatccaacaatgggaaaaagaaaaaatttcccttgaaaacggaagatggggacct
ttcatcaaatttggaaaagccatgttcaaaattccaaagaaaaatgatgataccaaatac
gatgcagaagaattgaaagaaacttccctggaagaagtaaagaaatggatcacagatcag
gataaaaatgcctttgcagaaaagaaaaagcctgccgcaaaaaaggcaactactgctaag
aaaactacagctgctaaaaaaccagctgctaaaaagaagtaa
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