Clostridium isatidis: BEN51_01350
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Entry
BEN51_01350 CDS
T05663
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cia
Clostridium isatidis
Pathway
cia03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cia00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BEN51_01350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cia03021
]
BEN51_01350
03400 DNA repair and recombination proteins [BR:
cia03400
]
BEN51_01350
Enzymes [BR:
cia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BEN51_01350
Transcription machinery [BR:
cia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BEN51_01350
DNA repair and recombination proteins [BR:
cia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BEN51_01350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
DUF211
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ASW42182
UniProt:
A0A343J9H4
LinkDB
All DBs
Position
265687..266634
Genome browser
AA seq
315 aa
AA seq
DB search
MLEIEKPVIECTEVNENGTYGKYVIEPLERGYGITLGNALRRILLSSLPGVAPTSVKIDG
VLHEFSTVHGVKEDVTEIILNIKSLALTMNGEGPKTIYIDAKGPGEITGADIKTDGDVEV
INKDLHIATLDEDGKLYMEITVNKGRGYVTQSKNKSEDLPISSIAVDSIYTPVKRVNFTV
ENTRVGQITDYDKLTLEIWTNGTIKIDEAISLSAKILIEHLKLFMSLGDSTNDVEIMIEK
EEDKKEKVLEMTVEELDLSVRSYNCLKRAGINTVQELASKSMDDMMKVRNLGKKSLEEVE
RKLRELNLSLRQNDE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaatagaaaagccagttatagagtgtacagaagtaaatgaaaatggtacttat
ggtaagtatgttattgaaccactagaaagaggatacggtataactcttggaaatgctcta
agaagaatacttttatcatcacttccaggagttgctccaacatctgttaagattgacgga
gtattacatgagttttcaactgtacatggagttaaggaagatgtaacagaaataattctt
aacataaaatctttagcattaactatgaatggtgaaggtccaaaaactatttatatagat
gctaaaggacctggtgaaattacaggtgctgatataaaaactgatggagatgtagaggta
ataaataaagatcttcacatcgctacgttagatgaagacggtaagttatatatggagata
actgttaataaaggaagaggatatgtaactcaaagtaaaaataagagtgaagatcttcca
atatcatcaatagcagtagattcaatatatacaccagttaaaagagttaattttactgtt
gaaaatacaagagttggtcaaattactgactacgataaattaactttagaaatttggact
aacggaactataaaaattgatgaagctataagcttatcagcaaaaattcttatagaacat
ttaaaactatttatgtcattaggagatagtactaatgatgtagaaattatgatagaaaaa
gaagaagataagaaagaaaaagtactagaaatgactgtagaagaattagatttatctgtt
agatcttataactgtctaaagagagcaggaattaatacagttcaagaacttgcctcaaaa
tcaatggatgatatgatgaaggtaagaaatctaggaaagaaatctttagaggaagtcgaa
agaaagcttagggagctaaacttaagtttaagacaaaacgatgagtaa
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