Clostridium isatidis: BEN51_05335
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Entry
BEN51_05335 CDS
T05663
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cia
Clostridium isatidis
Pathway
cia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BEN51_05335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cia03019
]
BEN51_05335
03016 Transfer RNA biogenesis [BR:
cia03016
]
BEN51_05335
Enzymes [BR:
cia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BEN51_05335
Messenger RNA biogenesis [BR:
cia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BEN51_05335
Transfer RNA biogenesis [BR:
cia03016
]
Prokaryotic type
tRNA degradation factors
BEN51_05335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH-I_KHDC4-BBP
KH_2
GcvP2_C
Par3_HAL_N_term
ZMYND11_CC
Motif
Other DBs
NCBI-ProteinID:
ASW42910
UniProt:
A0A343JBK2
LinkDB
All DBs
Position
complement(1138151..1140259)
Genome browser
AA seq
702 aa
AA seq
DB search
MKNVLKTNIAGRELKLEFGNIGMLSNLAAFISYGDTVILTNVNASEKPREGIDFFPLSVE
YEEKLYSVGKIPGGFIKREGRPSENAILHGRAVDRPLRPLFPKGYRNDVQVVCTVVSVEK
DNLPEILAINAASLALCLSSIPFSTPVGAVQVGLVNGKFVINPTSSEREESDLHLTVCAT
KERVMMIEAGGNEIPEDLMIEAIKFGFDACQDIIKFQEEAVAKFGKEKIVPELYEPNKDL
EKEITEFAGEMIKEAMWIMDKDERNAAVDALTEKVYAEFEEKYPDNVGDIKEILYNLQKE
VVRDMLLNHHRRPDGRAFDEIRPISCEVGVLPRTHGTGIFTRGLTQVMTVATLGAVGDIQ
IIDGIGEEESKRYMHHYNFPGYSVGEVKPLRGPGRREIGHGALAERALEPLIPSEEEFPY
TIRLVSEVLSSNGSTSQAAVCGSTLALLDAGVPIKRPAAGIAMGLITSEDLTREEVLTDI
QGIEDFFADMDFKVAGTEEGITSIQVDTKIKGLSFKVINDAIYGARKARLEIIDKIKECI
PEPRKEISKYAPKTSIININPEKIRDVIGTGGKVINKIIEETGVKIDIKEDGTVFVSATD
HEGVNRAISIIEGLTKEVKSGEIYLGKVIKTTPFGAFVEILPNKEGLCHISKLDKERVNK
VEDVVSIGDEILVKVTDIDSQGRINLSRKDALLEQLKDDKDN
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgtattaaaaactaatatagctggaagagaattaaaattagaatttggaaac
ataggaatgttatcaaatttagcagcatttattagctatggagatacagttattttaact
aatgtaaatgcttcagaaaagcctagggaaggtatagattttttcccattaagcgtagag
tatgaagagaaattatattcagtaggaaaaattcctggaggatttataaaaagggaagga
agaccttctgaaaatgcaatattacatggaagggctgtagatagacctttaagaccatta
ttcccaaagggttatagaaatgatgttcaagtagtttgtactgtagtgtcagttgaaaaa
gataacctaccagaaattctagcaattaatgcagcatctttagcattatgcttgtcaagc
attccgttctcaacacctgttggagcagttcaagtaggacttgtaaatggaaaatttgtt
ataaacccaacctcaagtgaaagagaagaaagtgatcttcatttaacagtctgtgcgaca
aaagaaagagtaatgatgattgaggctggtggaaatgaaattccagaggatcttatgatt
gaagctattaaattcggatttgatgcttgtcaggatataataaaattccaagaagaagca
gtagctaagtttggtaaagaaaaaatagttccagaattatatgaaccaaacaaagattta
gaaaaagaaataacagaatttgctggcgaaatgataaaagaagctatgtggattatggat
aaagatgaaagaaatgcagcagtagatgccttaactgaaaaggtttatgctgaatttgaa
gaaaaatatccagataatgttggagatataaaagaaatattatataatttacaaaaagaa
gttgttagagacatgcttttaaatcaccatagaagacctgatggtagagcttttgatgaa
ataagaccaattagctgcgaggttggagtcttgccaagaactcatggaactggtatcttt
acaagaggattaactcaagtaatgacagttgctaccctaggtgcagttggagatattcaa
ataattgatggaataggtgaagaagaatctaagagatatatgcatcactataacttccca
ggatattcagttggagaagtaaaacctcttagagggccaggaagaagagaaattggtcat
ggtgctttagcagaaagagcattggaaccgcttataccatctgaagaagaatttccttac
acaataagattagtttcagaagttttaagttcaaatgggtcaacatcccaggctgcagtt
tgcggaagtactttagctcttttagatgcaggtgttccaattaaaagaccagcagcaggt
attgcaatgggattaattacttcagaagatttaacaagagaagaagtattaacagatatt
caaggaattgaagatttctttgcagacatggattttaaagtagctggtacagaagagggg
ataacttcaatacaagtagatactaaaattaaaggtctaagctttaaagttattaatgat
gcaatatatggtgcaagaaaagcaagacttgaaattatagataaaattaaggaatgtatt
cctgaaccaagaaaagaaatttctaaatatgctccaaagacatcaattattaatattaat
ccggaaaaaattagagatgtaattggtactggtggtaaagtaattaataaaattattgaa
gaaactggagttaagattgatataaaagaagatggtacagtatttgtttctgcaactgat
catgaaggtgtaaatagggctatatcaattatagaaggcttaactaaagaagtaaaatca
ggagaaatttatttaggaaaggttataaaaacaactccatttggagcttttgttgaaata
cttccaaataaagaaggcttatgccatatatcaaaattagataaagaaagagtaaataag
gttgaagatgtagtttctattggagatgaaattttagttaaggtaactgatattgacagt
caaggaagaataaatctttctagaaaagatgctttattagagcaattaaaagatgataaa
gacaattaa
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