Clostridium isatidis: BEN51_05440
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Entry
BEN51_05440 CDS
T05663
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cia
Clostridium isatidis
Brite
KEGG Orthology (KO) [BR:
cia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cia03032
]
BEN51_05440
03400 DNA repair and recombination proteins [BR:
cia03400
]
BEN51_05440
Enzymes [BR:
cia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BEN51_05440
DNA replication proteins [BR:
cia03032
]
Prokaryotic type
DNA Topoisomerases
BEN51_05440
DNA repair and recombination proteins [BR:
cia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BEN51_05440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
Toprim_2
Peptidase_S7
Zn_ribbon_RPB9
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
ASW42931
UniProt:
A0A343JBM3
LinkDB
All DBs
Position
complement(1157694..1159787)
Genome browser
AA seq
697 aa
AA seq
DB search
MGQNLVIVESPAKAKTISKYLGKNYIVEASMGHVRDLPKSTLAVDVEDNFNPKYITIRGK
GELLNKLRKAAKKADKIYLATDPDREGEAISWHLANILKLDENEKCRIVFNEITKKAVKG
SIKEARKIDINLVDAQQARRILDRLVGYQISPILWKNVKWGLSAGRVQSAALKLICDREE
EINNFIPKEYWTVDCTAVKDRKKFPIKLSQYKNKKIEINTEDESNKIIEELKKGEFLVTK
VKDGTRIKNPLPPFTTSTLQQEASKKLNFITKRTMSIAQVLYEGVEVKGYGTVGLITYMR
TDSVRISDEAQENALKFIASNFGEEYVPKNKRVYKTKKNTQDAHEAIRPTIIEITPEIAK
ESLTAEQYKLYSLIWNRFMASQMEACELKTKSIEINNGDYKFKANGSIVNFDGFMKVYEY
NSEEEKDDVALPDLQEGDKLTKVDVEGKQHFTQPPARYTEASFVKLLEEKGIGRPSTYVP
TITTLLSRDYVRRDKKNLVATELGIIVNNILSEYFKEIVDVEFTAEMERNLDYIEEGKED
WRKIVGDFYKPLKEAIDRAEKEVSKVVIEDEATDIPCDKCGRMMVIKKGRYGKFLACPGY
PECENAKPIVEELDVPCPKCGGKVIAKRSKKGKKFFGCSNYPECDFVSWNEPLKEKCEKC
NSYMVLKYSKSKGNYAQCSNEECKNEVILTKEKESEN
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaaatcttgtaatagtagaatcacctgcaaaagcaaagactataagtaaatat
cttggaaaaaactacatagtcgaagcatcaatgggccatgtaagagatttaccaaaaagt
acattagctgtagatgttgaggataattttaaccccaagtatattacaattagaggtaaa
ggcgaattacttaataaattaagaaaggctgcaaaaaaggctgataaaatatatttagca
acagaccctgatcgtgaaggggaagcaatatcttggcatttagcaaatattttaaaatta
gatgaaaatgaaaaatgcagaatagtttttaatgaaataactaagaaggctgttaaaggt
tcaataaaagaagcgagaaaaatagatataaatttagtagatgctcagcaggcaagaaga
atattagatagattagttggttatcaaataagcccaattttatggaagaatgtaaaatgg
ggattaagtgctggtagagtgcaatctgctgcattaaaattaatctgcgatagagaagaa
gaaattaataatttcattccaaaagaatattggacagtagattgtactgcggttaaagac
agaaaaaaattccctattaaactttctcaatataaaaataagaaaatagaaataaataca
gaagatgaaagtaataaaataattgaagaattaaaaaagggagaatttctagtaacaaag
gtcaaagatggaacaagaattaaaaatccattaccaccttttacaactagtacattacaa
caagaagcgtcaaaaaaattaaattttattaccaaaagaactatgtcaatagcacaagtc
ttatatgaaggggtagaagttaaaggttacggcacagtgggtcttataacatatatgaga
acagactctgtaagaatttcagatgaggctcaagaaaatgcattaaaatttattgcttca
aattttggtgaagaatatgttcctaagaataaaagggtctataaaactaaaaaaaatact
caagatgcccatgaagctattaggccaacaattatagaaattacgcctgaaatcgcaaaa
gaatccttgactgcagaacaatataaattatattcgttaatatggaatagatttatggca
agtcaaatggaagcttgcgaattaaaaactaaaagcatagaaataaataatggagattat
aagtttaaagcaaatggttctatagtgaatttcgatggttttatgaaagtatatgagtat
aattcagaagaagagaaagatgatgtagctttaccagatttacaggaaggtgataaactt
actaaggttgatgtagaaggaaaacagcatttcactcagccgccagctagatatactgaa
gcttcctttgttaaacttcttgaagaaaagggtataggtagaccaagtacttatgttcca
acaattacaactttactaagcagagattatgttagaagagataagaaaaatctagtagca
accgaactcggtattatagtaaacaatattttaagtgaatattttaaagaaatagtagat
gttgaatttactgcagagatggaaagaaacttagattatatagaagaaggaaaagaagat
tggagaaaaatcgttggagatttttataaaccattaaaagaagctattgatagagcagaa
aaagaggtttctaaggttgttattgaagatgaggcaactgatataccttgtgataaatgt
ggtagaatgatggtaattaaaaaaggaagatatgggaagttcttagcttgcccaggttac
ccagaatgtgaaaatgcaaagccaatagtagaagaattagatgtaccttgtccaaaatgt
ggaggaaaagtaattgcaaaaagaagcaagaagggtaagaagttttttggatgcagtaat
tatccagagtgtgattttgttagctggaatgaacctctaaaggaaaaatgtgaaaaatgt
aattcttatatggtactaaaatatagtaaatcaaaaggtaattatgcacaatgctctaac
gaagaatgtaaaaacgaggttattttaactaaagaaaaggagagcgaaaactag
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