KEGG   Clostridium isatidis: BEN51_07335
Entry
BEN51_07335       CDS       T05663                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
cia  Clostridium isatidis
Brite
KEGG Orthology (KO) [BR:cia00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cia03016]
    BEN51_07335
Enzymes [BR:cia01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     BEN51_07335
Transfer RNA biogenesis [BR:cia03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    BEN51_07335
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS Dynein_heavy
Other DBs
NCBI-ProteinID: ASW43301
UniProt: A0A343JCP3
LinkDB
Position
1552497..1553039
AA seq 180 aa
MRVFIAIEFQDKIKDYLKEIQDLTKAKSEKGNFTIKDNFHLTLKFIGEVDLTLIEKIKEA
IDKAVIGHNNFKLYFNKIGKFPRGSKSILWVGLKIEKELYLLYDKIENELEKINIKKEER
KFTPHITIGREVVLKENFNNFLKEIELKKLPILVDKVSLMESTRVNGELKYIPLYVKNFK
NT seq 543 nt   +upstreamnt  +downstreamnt
ttgagagtttttatagcaatagaatttcaagataaaataaaagattacttaaaggaaatt
caagatcttacaaaagctaaaagtgaaaaaggcaattttacaattaaggataatttccat
ctaacccttaaatttattggagaagttgatttaacactaattgaaaagattaaagaagcc
attgataaagccgtaataggtcataataattttaaattgtattttaataaaataggtaaa
tttcctagaggaagcaagtcaatactttgggtaggattaaaaatagaaaaggaactatat
ttactttatgataaaattgaaaatgaacttgaaaagataaatataaaaaaagaggaaaga
aaattcactccccatattaccattggaagagaagtagtacttaaagaaaactttaataat
ttcttgaaagagattgaactaaaaaaactaccaatcttagtagataaagtttctctcatg
gaaagtactagagtaaatggagagttaaaatatattcctctttatgtgaaaaactttaaa
taa

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