Clostridium isatidis: BEN51_07895 Help Entry BEN51_07895       CDS       T05663                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism cia  Clostridium isatidis Pathway cia02020   Two-component system cia02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:cia00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     BEN51_07895  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     BEN51_07895  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cia03021]     BEN51_07895 Transcription machinery [BR:cia03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      BEN51_07895 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_11 HTH_23 Sigma70_r4 HTH_17 HTH_29 Sigma70_r4_2 GerE Fe_dep_repress HTH_21 MarR HTH_5 HTH_Crp_2 HTH_12 HTH_20 HTH_Tnp_ISL3 HTH_3 HTH_36 HTH_IclR LacI HTH_24 Glyco_transf_61 HTH_10 Motif Other DBs NCBI-ProteinID:  ASW43401 UniProt:  A0A343JCZ3 LinkDB All DBs Position complement(1685588..1686973) Genome browser AA seq 461 aa AA seqDB search MKLDFSLNMVQEQKLVMTQQMQQSIKILQMSTYDLREYIENEFAENPILEENFDFIQDSN SYVDKINYKEIIKYLESDNYGYYNYSEFKDKEEDVSPFNFICKKESLTEYLQEQLVEIDE DEYKKSIVSYFIENLDNRGYLDIPLEDICKELKISSALGREALEILQDLEPYGIGARNLS ECLKIQLRKMGMLNEKLEIIINNHLNLIAENKFNLIAKILKITPKEAQDLGDIIKKLEPK PSRGFYTGEEVKFIIPDAEIRKIDGQYFVIMNENVLPKLSISKIYKNILNNEQDIYMKNY VKEKLNSAVFLIKCIEQRKSTLLKILENIVEKQKEYFDKGQKFLKPMTLKEIAEDLNIHE STVSRAIKDKYILTNKGTLRIKDLFSNGISKNTAEGGDVAVINIKNIIKEIIDNEDKRKP LSDEQICTELKKRNLNISRRTVAKYREEMNIKSSSKRKRIE NT seq 1386 nt NT seq  +upstreamnt  +downstreamnt atgaagttagattttagcctaaatatggttcaagagcaaaaactagttatgacccaacaa atgcagcaatcaataaagatattacaaatgtcaacttatgatttaagagaatatatagaa aatgaatttgctgaaaatcctattttagaagaaaattttgattttattcaagatagcaat agttatgtagataaaatcaattataaagaaataataaaatacttagaatctgataactat ggttattacaactatagtgaatttaaagataaagaggaggatgtttctccttttaatttt atttgtaaaaaagaatctttaactgaatacctgcaagaacaattagttgaaatagatgaa gatgaatataaaaaatctattgtatcatactttatagaaaacttagataatagaggatat ttggacatacctttagaagatatatgcaaagaattaaaaatatcttctgctttgggaagg gaagctttagaaattcttcaagatttagaaccctatggaataggggctagaaatttaagt gaatgtttgaaaatacaacttagaaaaatgggaatgttaaatgaaaaattagaaataata ataaataatcatttaaatcttattgcagaaaataagtttaatttaattgccaaaatctta aaaattactccaaaggaagcacaagatttaggtgatattataaaaaaattagaacccaaa ccatcaagaggcttttatactggtgaagaagtaaagtttattattcctgatgcagaaata agaaaaattgacggacagtattttgtaataatgaatgaaaatgtattgcctaagctatca atcagtaaaatttataaaaatatattgaataatgaacaagatatttatatgaaaaactat gtaaaagaaaagttaaatagtgctgtctttttaattaaatgcatagaacaaagaaagagc actttattaaaaatattagaaaatatagtagaaaagcaaaaagaatactttgataaggga caaaaattcttaaagccaatgacactaaaagaaatagcagaggatctcaatattcatgaa tcaacagtaagcagggcaataaaagataaatatattcttactaataagggaacattaaga ataaaagatttattttcaaatggaataagtaaaaatactgctgaaggtggagatgtagca gtaataaatataaaaaatataattaaagaaattatagataatgaagataagaggaaacca ctgtcagatgagcaaatatgtacagaattaaagaaaagaaatttaaatatatctagaaga actgttgctaaatatagggaagaaatgaatataaaatcctctagcaaaagaaaaagaata gaatga

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