Citrobacter sp. TSA-1: HF677_002190
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Entry
HF677_002190 CDS
T09275
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
cib
Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cib03019
]
HF677_002190 (rng)
03009 Ribosome biogenesis [BR:
cib03009
]
HF677_002190 (rng)
Messenger RNA biogenesis [BR:
cib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HF677_002190 (rng)
Ribosome biogenesis [BR:
cib03009
]
Prokaryotic type
rRNA processing factors
HF677_002190 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
DUF8260
Motif
Other DBs
NCBI-ProteinID:
QKE18538
LinkDB
All DBs
Position
454337..455806
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AA seq
489 aa
AA seq
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MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDI
GLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIESETERERLKKVVADYCDEQGGFIIRTAAEGVCEE
DLASDAAYLKRVWTKVMERKKRPQTRYQMYGELALAQRVLRDFADAQLDRIRVDSRLTYE
ALLEFTAEYIPEMTSKLEHYSGRQPIFDLFDVENEIQRALERKVELKSGGYLIIDQTEAM
TTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRV
LHSLEQALSKDRVKTSINGFSQLGLVEMTRKRTRESVEHVLCNECPTCHGRGTVKTVETV
CYEIMREIVRVHHAYDSDRFLVYASPAVAETLKGEESHALAEVEIFVGKQVKVQVEPLYN
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgaattgttggtaaacgtaacgccatcggaaactcgggtggcttacattgat
ggcggtattctgcaggaaattcatattgaacgtgaggcgcgacgcggaatcgtaggcaat
atctacaaaggtcgtgtaagtcgtgtacttccgggtatgcaggcggcttttgtagatatt
ggactggataaagccgcatttcttcacgcttcagacatcatgccgcacaccgaatgcgtg
gcgggtgaagaacaaaaacagttcaccgtgcgcgacatttctgaactggtgcgccagggc
caggatctgatggtgcaggtggtaaaagatccgttgggtactaagggcgcacgcctgacg
acggacatcacgcttccttcccgttacctcgtctttatgccaggtgcttcgcacgttggc
gtttcccaacgtatcgaaagcgaaaccgaacgcgaacgcctgaaaaaagtggtggcggat
tactgcgatgaacagggcggattcatcattcgcacagcggcggaaggcgtctgcgaggag
gatctagcctcagatgctgcctacctgaagcgcgtctggactaaagtcatggagcgtaaa
aagcgcccgcaaacgcgctaccagatgtacggcgaactggcgctggcgcagcgcgtgttg
cgtgattttgctgatgcccagcttgaccggatccgcgttgactctcgtcttacttatgaa
gcgttgctggagttcacagcggaatatatccccgagatgaccagcaagctggaacattac
agcgggcgccagcccatttttgatctctttgacgttgagaatgaaatccagcgcgcgctg
gaacgcaaggttgaactgaaatccggcggctatctgatcatcgatcaaactgaagcaatg
accaccgtcgatatcaataccggagcgtttgttgggcatcgtaatctcgacgacactatc
tttaatactaatattgaagcaacgcaggccattgctcgtcagctgcgtctgcgtaacctc
ggcggcattatcattatcgattttatcgacatgaataatgaagatcaccgtcgacgggtg
ctgcactctctggaacaggcgctgagcaaggatcgcgtaaaaaccagcatcaacggtttt
tcacagctgggcctggtggagatgacgcgcaaacgcacgcgtgaaagcgtggagcatgtg
ttgtgcaacgagtgtccgacctgtcatgggcgcggtacggtgaaaaccgtggaaactgta
tgctatgaaatcatgcgcgaaatcgtgcgggtacaccatgcatatgactccgatcgtttc
ctggtttatgcatctccggcagtggctgaaaccctgaagggtgaagagtcacatgcgttg
gcggaagtggaaatctttgtcggcaaacaggttaaagtacaagtcgaaccgctgtataac
caggagcagttcgacgttgtcatgatgtaa
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