Citrobacter sp. TSA-1: HF677_002380 Help Entry HF677_002380      CDS       T09275                                  Symbol rpoN Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism cib  Citrobacter sp. TSA-1 Pathway cib02020   Two-component system cib02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:cib00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     HF677_002380 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     HF677_002380 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cib03021]     HF677_002380 (rpoN) Transcription machinery [BR:cib03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      HF677_002380 (rpoN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID Motif Other DBs NCBI-ProteinID:  QKE18574 LinkDB All DBs Position complement(499399..500832) Genome browser AA seq 477 aa AA seqDB search MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDLHDEIDTQE KQDSESLDTADALEQKEMPEELPLDASWDEIYTAGTPSGTSGDYIDDELPVYQGETTQSL QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVTLDDILESMGDDDVGMDEIEAVLK RIQRFDPVGVAAKDLRDCLLIQLSQFDKATPWLEEARLIISDHLDLLANHDFRTLMRVTR LKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNDRWVVELNGDSIPRLQIN QHYAAMCNSARNDADSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFDQGEE FMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI RALVKKLIAAENPAKPLSDSKLTSMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV NT seq 1434 nt NT seq  +upstreamnt  +downstreamnt atgaagcaaggtttgcaactcaggcttagccaacaactggcgatgacgcctcagctacaa caggctatccgtctgttgcagctgtccacgctggaacttcagcaagaacttcagcaagcg ctggaaagtaacccactgctcgagcaaaccgatcttcacgacgaaattgatacccaggaa aaacaggacagcgaatccctcgacaccgcagatgctctcgaacaaaaagagatgccagag gagctgccgcttgacgccagttgggatgaaatttacaccgccggtacgccttctggcacc agcggggattacatcgacgacgaactgcctgtgtatcagggggagaccacgcaatcactg caggattacctgatgtggcaagtggagctgaccccgttctcggataccgatcgggcgatt gcgacatccattgttgatgcggtagacgaaaccggttatctcaccgtaaccctggacgat attctcgaaagcatgggcgatgacgacgtcggcatggacgaaatcgaagccgtgcttaaa cgcattcagcgttttgatcccgtgggcgtggcggccaaagatctccgcgactgcttattg atccaactttcacagtttgataaagccacgccgtggctggaagaagcgcgcctgatcatc agcgatcacctcgatctgttagccaaccatgacttccgcacgctgatgcgcgtaacccgg ctgaaagaagatgtgctgaaagaagccgtcaatcttattcagtccctggaccccagacct gggcagtctatccagaccggggagccagaatacgttattccggatgtactggtgcgtaag cataacgatcgctgggtggtcgaactcaacggcgacagcattccacggttgcagattaac cagcactacgccgccatgtgcaacagcgcgcgcaacgatgctgacagccagtttattcgt agcaatctgcaggatgcaaagtggctgattaaaagcctggaaagtcgcaatgatacgctg ctgcgcgtcagtcgctgtatcgttgaacagcagcaagccttctttgatcaaggcgaagag tttatgaaaccgatggtgctggcggatatcgcccaggccgtcgagatgcacgaatcgacc atttcccgagtgaccacgcaaaagtatctgcacagtccgcgcggcatttttgaattgaag tatttcttttccagtcacgttaacactgaaggcggaggcgaagcctcatccacagctata cgtgcactggtgaagaaattaattgctgcggaaaaccccgcgaaaccgctgagtgacagc aagttaacctctatgctgtcagaacagggtatcatggtggcacgccgcactgttgcgaag taccgagagtctttatccattccgccgtcgaaccagcgcaaacagctggtctga

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