Citrobacter sp. TSA-1: HF677_003170
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Entry
HF677_003170 CDS
T09275
Name
(GenBank) LysR family transcriptional regulator
KO
K21742
LysR family transcriptional regulator, transcriptional activator for ttdABT operon
Organism
cib
Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cib03000
]
HF677_003170
Transcription factors [BR:
cib03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HF677_003170
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
QKE18722
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Position
659309..660250
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AA seq
313 aa
AA seq
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MLNTYPLAKDLQVLVEIVHSGSFSAAAAALGQTPAFVTKRIQILESTLGTTLLSRSARGV
ILTESGQRCYEHAQAILAGYQHLVDDVTQLKTRPAGMIRIGCSFGFGRSYIAPAITELMH
SYPELQVHFELYDRQIDLAQDNIDLDIRINDEIPDYYIAHLLTKNRRILCAAPTYLQKYG
EPTTLQELSRHDCLVTKERDMTHGVWELDNGQEKKSVKVAGHLSSNSGEIVLQWALQGKG
IMLRSEWDLQPFLASGELVRVLPDYAQSANIWAVYQEPLYRSVKLRVCVEFLATWCQHRL
GKPVEGYHIPHAG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacacgtatcccctcgcgaaagacctgcaggtcctggttgaaattgttcatagc
ggcagcttcagtgccgccgccgcggcgctgggccaaacacccgcgtttgtgacgaaacgc
attcagatccttgagtccacgctggggacgacgctgctaagccgctccgcgcgcggcgtg
atactcacggagagtggtcaacgttgttatgaacatgcgcaggctattcttgcgggctat
cagcatctggtcgatgacgtcacgcaactcaaaacgcgcccggcagggatgattcgtatc
ggctgtagctttggctttgggcgcagttatattgcaccggctattaccgaactgatgcat
agctatcctgaattacaggtgcattttgaactttatgatcggcaaattgatttggcgcag
gataatatcgatttggatattcgtattaatgacgagattccggattattatattgcgcat
ttgttaacgaaaaatagaagaatattatgtgcagcgccgacgtatttacaaaaatacggt
gagccgacaacgctgcaggaattaagtcgtcatgattgcctggtcactaaagaacgcgat
atgacccacggggtgtgggagctggataacggccaggagaaaaagtcggtcaaggtggcg
ggacatctttcctctaacagcggcgagattgtgttgcagtgggcgctacagggaaaaggg
attatgctgcgttccgaatgggacctgcagccgtttctggcaagcggtgaactggtgcgc
gtgctgccggactatgcgcaaagcgccaatatctgggcggtttatcaggagccgctgtat
cgcagcgtgaagcttcgggtgtgcgtggagtttctggcgacgtggtgccagcaccgatta
ggcaaaccggtggaggggtatcacattccccacgccggataa
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