KEGG   Citrobacter sp. TSA-1: HF677_003510
Entry
HF677_003510      CDS       T09275                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
cib  Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:cib00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cib02044]
    HF677_003510 (tssC)
Secretion system [BR:cib02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HF677_003510 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 APG6 PaaA_PaaC
Other DBs
NCBI-ProteinID: QKE18787
LinkDB
Position
727419..728966
AA seq 515 aa
MLMSVKNENATGGESVVLERPVAGGVYASLFEKINLNPVSELSALDIWQDAQAMSDATAD
ERLTAGMQVFLECLTKAGSKVEKLDKNLIDHHIAELDYQISRQLDAVMHSEEFQAVESLW
RGVKSLVDKTDFRQNVKVELLDMSKEDLRQDFEDSPEIIQSGLYKHTYIDEYDTPGGEPI
AALISAYEFDASAQDVALLRNISKVSAAAHMPFIGSAGPKFFLKDSMEEVAAIKDIGNYF
DRAEYIKWKSFRETDDARYIGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHDKYLWT
NASFAFASNMVRSFINNGWCVQIRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETR
EFEFANLGFIPLSYYKNRDYSCFFSANSTQKPALYDTADATANSRINARLPYIFLLSRIA
HYLKLIQRENIGTTKDRRLLELELNTWVRSLVTEMTDPGDELQASHPLRDAKVVVEDIED
NPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKS
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgctgatgtctgtaaaaaatgagaatgcgactggtggcgaaagcgtggtgctggaacgt
cctgttgcgggcggggtttatgcgtccctgtttgaaaaaatcaacctgaacccggtctct
gagctgagtgcgctggatatctggcaggacgcgcaggcgatgtcggatgcgactgcggat
gagcgtctaacggcggggatgcaggtatttctcgaatgcctgacgaaagcgggctcaaaa
gttgaaaaactcgataaaaacctcattgaccaccatatcgcagagctggactaccagatt
agccgtcagctggatgcggtaatgcatagcgaagaattccaggctgtggagagcctgtgg
cgcggcgtgaaatccctggtcgacaaaactgatttccgtcagaacgtgaaggttgaactg
ctggatatgtccaaagaagacctgcgtcaggacttcgaagacagcccggaaatcatccag
agtggactgtataaacatacatacattgatgagtatgacaccccgggcggtgaaccgatt
gccgcgctgatttccgcttacgagtttgatgcgtctgcgcaggatgtcgctctgctgcgc
aatatttcaaaagtgtctgccgcagcgcatatgccgtttatcggctctgccggcccgaaa
tttttcctcaaggattcaatggaggaagtggcggccatcaaagatattggtaactacttt
gaccgtgcggagtacatcaagtggaaatccttccgcgagacggacgatgcccgctatatc
ggtctggtgatgccgcgtgtactgggtcgtctgccttatggtccggacaccgtgccagtg
cgcagcttcaactatgtggaagaagtgaaaggcccggatcacgacaaatacctgtggact
aacgcctcgtttgcttttgcgtctaacatggttcgcagcttcatcaacaacggctggtgt
gtgcaaatccgtggcccacaggccggtggtgccgtgcaggatctgcctattcatctgtac
gatctgggcaccggcaatcaggtcaagatcccgtcagaagtgatgatcccggaaacccgc
gaatttgagttcgcgaatctgggcttcattccgctgtcctactataaaaatagagattat
tcctgcttcttcagcgctaactccacccagaagccggcactgtatgacactgcggatgca
acggccaacagccgtatcaatgcccgtctgccgtacattttcctgctgtcgcgtattgcg
cactacctgaagcttatccagcgcgaaaacatcggcaccaccaaagaccgtcgtctgctg
gagcttgagctcaacacctgggtgcgcagtctggtgaccgaaatgaccgatccgggcgac
gagctgcaggcctctcacccactgcgtgatgcaaaagtggtggtggaagacatcgaagac
aacccgggcttcttccgcgtgaagctgtacgccgtaccgcacttccaggtcgaagggatg
gacgtcaacctgtcactggtttcccagatgccgaaagccaagtcataa

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