Citrobacter sp. TSA-1: HF677_004185
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Entry
HF677_004185 CDS
T09275
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HF677_004185 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cib01007
]
HF677_004185 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cib03016
]
HF677_004185 (lysS)
Enzymes [BR:
cib01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HF677_004185 (lysS)
Amino acid related enzymes [BR:
cib01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HF677_004185 (lysS)
Transfer RNA biogenesis [BR:
cib03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HF677_004185 (lysS)
Prokaryotic type
Other AARSs
HF677_004185 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QKE18912
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All DBs
Position
872118..873635
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AA seq
505 aa
AA seq
DB search
MSEQHVQGADAVADLNNELKTRREKLASLREQGIPFPNDFRRDHTSDQLHADFDAKENEE
LEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD
ILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES
RNTFKVRSQIMAGIRQFMVGRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT
LAQNVLGTTEVPYGEEVFDFGKPFEKLTMREAIQKYRPETNMADLDNFDSAKAIAESIGI
KVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGG
REIGNGFSELNDAEDQAQRFQDQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPVK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaacacgtacagggcgctgacgcggtagccgaccttaacaatgaactgaaa
acgcgccgtgagaagctggcgagcctgcgcgagcaggggatccccttcccgaacgatttc
cgtcgcgatcatacctcagaccaactgcatgctgacttcgacgcgaaagaaaacgaagag
ctggaagcgctgaacattgaggtatccgttgctggccgtatgatgacccgccgtattatg
ggtaaagcatcattcgttacgctgcaggatgttggcggccgtattcagctgtacgttgct
cgcgacgatctgccggaaggcgtctacaacgagcagttcaaaaaatgggatctgggcgat
atcctcggcgcgaaaggtaagttgttcaagaccaagaccggtgagctgtctatccactgc
accgagctgcgtctgctgacgaaagcgttgcgcccattgccggataaattccacggtctg
caggatcaggaagcgcgctatcgtcaacgctacctggacctcatctctaacgatgaatcc
cgtaatacctttaaagtgcgttcacagattatggctggtatccgccagttcatggttggt
cgtggctttatggaagtagaaaccccgatgatgcaggtgatccctggcggggcggcagcg
cgtccgtttatcacccatcataacgcgctggatctggacatgtacctgcgtatcgcgccg
gaactgtacctcaagcgcctggtggttggcggtttcgaacgcgtattcgaaattaaccgt
aacttccgtaacgaaggcatctctgttcgccataatccagagttcaccatgatggaactc
tacatggcttatgcggactacaaagatctgatcgaactgaccgaatcgctgttccgtacg
ctggcgcagaatgttctgggaacgactgaagtgccttacggcgaagaagtctttgacttt
ggtaagccgttcgaaaaactgacgatgcgcgaagcgattcagaaataccgtccggaaacc
aacatggccgatctggataacttcgattctgcaaaagcgattgcggaatctatcggtatc
aaagttgagaagagctggggtctgggccgtatcgtgaccgaaatctttgaagaagttgca
gaagcgcacctgattcaaccgaccttcattaccgagtacccggcagaagtttctccgctg
gcgcgtcgtaatgatgaaaatccggaaatcaccgatcgcttcgaattcttcattggcgga
cgtgaaatcggtaacggcttcagcgagctgaacgatgcagaagatcaggcgcagcgtttc
caggatcaggttaacgccaaagatgcaggtgacgacgaagcgatgttctacgacgaagac
tatgttaccgctctggaacacggtctgccgccgactgcgggcctgggcattggtatcgac
cgtatggttatgctgttcacaaacagccatactatccgcgacgtaatcctgttcccggca
atgcgcccggttaaataa
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