Citrobacter sp. TSA-1: HF677_004430
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Entry
HF677_004430 CDS
T09275
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HF677_004430 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cib03019
]
HF677_004430 (rppH)
Messenger RNA biogenesis [BR:
cib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HF677_004430 (rppH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
QKE18959
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Position
929489..930019
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AA seq
176 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINAGETAEQAMYRELFEEVGL
SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSSDAEINMQTSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMALQESTPKPQSAPAYRRKRG
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgacgatggctaccgcccgaatgtagggatagtaatttgtaaccgccagggg
caggtcatgtgggcccggcgatttggtcagcactcctggcaattcccgcaaggtgggata
aatgcaggagagacagcagagcaggcgatgtaccgggaactctttgaagaagtgggtctc
agtcgtaaagatgtacggatccttgcttctactcgtaactggttgcgttacaagttaccg
aaacgtttggtgcgttgggacacgaagccggtttgtatcggccagaaacaaaaatggttt
cttctgcaattggtcagcagcgatgctgaaatcaatatgcaaaccagcagtacacctgag
ttcgacggctggcgctgggtgagttactggtatccggttcgacaggtggtgtcatttaaa
cgcgatgtctatcgcagggtgatgaaagaattcgcaagtgttgtcatggcgcttcaggag
agcactcctaagccgcaaagcgcacctgcgtacagacgtaaaagaggttaa
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