Citrobacter sp. TSA-1: HF677_004470
Help
Entry
HF677_004470 CDS
T09275
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HF677_004470 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cib03400
]
HF677_004470 (recC)
Enzymes [BR:
cib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HF677_004470 (recC)
DNA repair and recombination proteins [BR:
cib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HF677_004470 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QKE18967
LinkDB
All DBs
Position
936052..939420
Genome browser
AA seq
1122 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLAQKFSIAANI
DFPLPASFIWDMFVRVLPDIPKESAFSKQSMSWKLMTLLPQLLDGDDFALLRHYLTDDTD
KRKLFQLSSRAADLFDQYLVYRPEWLTLWEAGRLVEGLGESQAWQAPLWKALVEHTEELG
QPRWHRANLYQRFIQTLESASECPQGLPSRVFICGISALPPVYLQALQALGKHIDIHLLF
TNPCRYYWGDIKDPAWLAKLMARQRRHSFEERHLPLFRDSQKAEGLFNSDGEQDVGNPML
ASWGKLGRDYIYLLSELENSQELDAFVDITPDNLLHNIQSDILELESHAVAGVTLEEYSR
SDNKRRLELNDTSVTFHVCHSPQREVEILHDRLLAMLEADPTLTPRDIIVMVADIDSYSP
FIQSVFGSAPAERYLPYAISDRRARQSHPVLQAFISLLSLPDSRFVSEDVLALLDVPVLA
ARFNINEEGLRYLRLWVNESGIRWGIDDDNVRELELPPTGQHTWQFGLTRMLLGYAMESA
QGEWQSVLPYDESNGLIAELVGHLASLLMQLNLWRRGLAQERPLEEWLPVCRDMLNDFFL
PDADTEAAMTLIEQQWQAIITEGLGAEYGDAIPLSLLRDELAQRLDQERISQRFLAGPVN
ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPMRGDRSRRDDDRYLFLEAL
ISAQQTLYISYIGRSIQDNSERFPSVLVQELMDYIGQSHYLPGDESLTCDQSEARVKAHI
TRLHTRMPFDAQNYLPGEQQSYAREWLPAASLSGKAHTDFVQTLPFEMPETLTLETLQRF
WAHPVRAFFQMRLRVNFRSEESEIPETEPFTLEGLTRYQLNQQLLNTLVEEKDAEQLFRR
FRAAGTLPYGPFGEILWDTQRQEMQSLAERIIACRQPCQSMEIDLNCNGVQITGWLPQVQ
EDGLLRWRPSLISIAQGVQLWLEHLVYCASGGTGESRLFLRKDGEWRFPPLDAEQALLYL
SQLIDGYREGMSSPLLVLPESGGGWIKTCYDAANDAMLDDDATLQKARSKFLQAYEGNMM
VRGESDDIWYQRLWRQLDAATLETIVLQSQRYLLPIFRFNQS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtctaccactccaatcgtctggatgtgctggaagcgttaatggaatttatc
gttgagcgcgagcggctggacgacccctttgaacctgagatgatcctggttcaaagtacc
ggtatggcgcagtggctacaaatgacccttgcacagaagtttagtattgccgccaacatc
gattttccgctgcccgcgagttttatctgggatatgtttgtgcgcgtgctgccggatatc
ccgaaagagagcgcgttcagcaaacagagcatgagctggaagttgatgacgctgttgccg
caattgctggatggcgatgacttcgcattgctgcgccactatctgacggacgacaccgat
aaacgtaagctgtttcagctttcctcgcgcgcggctgacctctttgaccagtatttagtc
tatcgccctgagtggttgaccctgtgggaagctgggcgactggttgagggactcggcgag
tctcaggcctggcaggcgccgttgtggaaagcgctggtggaacacaccgaggaattgggc
caaccgcgctggcatcgcgccaatttataccaacgatttattcagactctggaaagtgcg
tccgagtgcccgcaggggctgccttctcgcgtctttatttgcggcatttcagcgctgccg
ccggtttatttgcaggcattgcaggcgctgggcaagcacattgatattcatctgctgttt
accaacccttgtcgctactactggggagatataaaagatcccgcttggctggcgaagctg
atggcgcgtcagcgtcggcacagctttgaagaacgccatctgccgctgtttcgcgatagt
cagaaagccgaaggattgtttaacagcgatggtgaacaggatgtgggcaacccgatgctg
gcctcgtggggcaaactggggcgcgattacatttatttgctttcagaactggaaaatagt
caggagctggatgcgtttgtcgatataacgcctgacaatcttttgcataatattcaatcg
gatattctggaacttgaaagtcatgccgtggcgggcgttacgctggaagagtattcgcgt
agcgacaataaacgacggcttgaactgaacgacaccagcgtgactttccatgtttgtcat
agcccacagcgcgaggtagaaattcttcatgaccgcctgctggcaatgctggaagcggat
cccacgctgacgccgcgcgatattattgtgatggtggcggatatcgacagctacagccca
tttattcagtcggtctttggcagcgcgccagctgagcgttacttaccatatgcgatttcc
gaccgtcgggcgcgccagtctcatcccgtcttacaggcctttattagcctgttgtcgctg
ccggatagccgttttgtctcagaggatgtgctggcattactggatgtgcccgtgctggcg
gcgcgtttcaatatcaatgaagaagggctgcgctatcttcgtttatgggtcaatgaatcc
gggattcgctggggaattgacgacgataacgtgcgtgaactggaacttccgcctacaggt
cagcatacctggcaatttggtttaacgcgcatgctgctcggctacgcgatggaaagcgcg
cagggcgagtggcaatcggtattgccatacgatgagtccaacggtttgattgccgagttg
gtagggcatctggcctcgttgctgatgcagctcaatctctggcgtagagggttagcgcag
gaacggccgctggaagagtggctgcccgtttgtcgggacatgcttaatgatttcttcctg
ccggatgcagataccgaagcggcgatgacgctgattgaacagcagtggcaggccattatc
actgaaggtctgggggctgagtatggtgatgccataccgctttctctattgcgagatgag
ctggctcagcgtcttgaccaggagcgcattagccagcgcttcctggcggggccagttaac
atttgtacgctgatgccgatgcgctctattcctttcaaggtggtgtgcctgctgggtatg
aacgatggcgtttatccgcgtcagcttgcgccgttgggctttgatttgatgagtcaaaaa
ccgatgaggggcgatcgcagccgtcgcgatgatgaccgctacctgtttcttgaagcattg
atttcagcacagcaaacgctctacatcagctacattggccgctccattcaggacaacagc
gagcgcttcccgtcggtactggtgcaggaactgatggactatatcgggcaaagccactat
ctgccgggcgatgaatcattgacctgcgatcaaagcgaagcgcgggtaaaagcacacatt
acccgtttgcatacccgtatgccctttgatgcacaaaactatctgccgggcgaacagcaa
agctatgcccgggaatggctgcctgcggcgagcctgtcaggaaaagcgcacacggatttt
gtccagacgcttccctttgagatgcctgaaacgctgacgctggaaacgctgcagcgattt
tgggctcatccggtaagggcttttttccagatgcgtctgagggtcaacttccgctctgaa
gaaagtgagatcccggaaacggaaccgttcactcttgaaggattaacccgctatcagctt
aatcagcaattgcttaacacgctggttgaagagaaggatgctgaacaactgtttcgccgt
tttcgtgcggcgggcacgcttccctatgggccatttggcgaaattctgtgggatacgcag
cgtcaggagatgcagtcgctggctgaacgcattatcgcctgtcgtcagccctgccagagt
atggaaatcgatcttaactgtaacggcgtgcaaatcaccggttggctgccacaggtgcaa
gaggacggtttgttgcgctggcgcccatctttgataagcattgcgcagggtgtgcaactt
tggctggaacatcttgtctattgtgccagtggcggtacgggagagagccggttgttcctg
cgtaaagacggggaatggcgttttccgccactggatgcagagcaggcgctgctgtacctg
tcgcagctcattgacgggtatcgggaaggcatgtcgtcaccattgctggtattgcccgaa
agcggcggcggctggataaaaacctgttatgacgccgcaaatgatgccatgttagatgac
gatgcaacgttgcaaaaagcgcgcagtaagtttctgcaggcctatgaaggcaacatgatg
gtacggggtgaaagtgatgatatctggtatcagcgtctttggcgtcagctggatgcggct
acgctggagaccattgttttacagtctcagcgctacctgttaccgatttttcgctttaat
cagtcatga
DBGET
integrated database retrieval system
