Citrobacter sp. TSA-1: HF677_004540
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Entry
HF677_004540 CDS
T09275
Symbol
gcvA
Name
(GenBank) glycine cleavage system transcriptional regulator GcvA
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
cib
Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cib03000
]
HF677_004540 (gcvA)
Transcription factors [BR:
cib03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HF677_004540 (gcvA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR_2
Motif
Other DBs
NCBI-ProteinID:
QKE18978
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Position
955712..956629
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AA seq
305 aa
AA seq
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MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL
LLTEEGQSYFLDIKEIFSQLTDATRKLQARSAKGALTVSLLPSFAIQWMVPRLSSFNSAY
PGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGDKPL
KTPEDLAKHTLLHDASRRDWQAYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGIALAN
NVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILAKAATEQEKFR
FRYEQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgattaccacccctaaatgcgttgcgtgtttttgatgctgcagcgcgtcat
ttgagctttactcgcgcagcagaagagctttttgtgacgcaggccgcagtaagtcatcaa
atcaagtcacttgaggatttcctggggctgaagctgtttcgtcgacgcaatcgatctttg
ctgttaacggaagaaggccaaagctactttctcgacatcaaagagattttttcgcaatta
accgacgcgacgcgtaaacttcaggcacgcagtgcaaaaggtgcgctcactgtgagttta
ttgcccagttttgcaatccaatggatggttcccagactctctagctttaactcagcttat
ccgggaatcgatgtcaggatccaggcggtggaccgtcaggaagacaaactggctgacgat
gttgatgtggcgattttctacggacgtggcaactggccgggtctgcgcgttgaaaaattg
tacgcagaatatttattgccggtctgctcgccgctattactcaccggtgataaaccgcta
aagacgcccgaagatctggcgaaacacacattattgcacgatgcgtcacgccgtgactgg
caagcctatacgcgccagcttggcctgaatcatatcaacgtacagcagggacccatcttc
agccatagcgccatggtgctccaggctgctatccatggacagggaattgcgttggctaat
aacgtcatggcgcaatccgaaatagaagccggacgtctggtctgtccgtttaatgatgtt
ctggtcagcaaaaacgcattttatctggtttgtcatgacagtcaggcagaactgggtaaa
atagccgccttccgtcagtggattctggcgaaagcggccacggaacaagaaaaattccgc
tttcgttatgaacaataa
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