Citrobacter sp. TSA-1: HF677_007215
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Entry
HF677_007215 CDS
T09275
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib00071
Fatty acid degradation
cib00280
Valine, leucine and isoleucine degradation
cib00310
Lysine degradation
cib00362
Benzoate degradation
cib00380
Tryptophan metabolism
cib00410
beta-Alanine metabolism
cib00640
Propanoate metabolism
cib00650
Butanoate metabolism
cib00907
Pinene, camphor and geraniol degradation
cib00930
Caprolactam degradation
cib01100
Metabolic pathways
cib01110
Biosynthesis of secondary metabolites
cib01120
Microbial metabolism in diverse environments
cib01200
Carbon metabolism
cib01212
Fatty acid metabolism
Module
cib_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HF677_007215 (fadJ)
00650 Butanoate metabolism
HF677_007215 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
HF677_007215 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HF677_007215 (fadJ)
00310 Lysine degradation
HF677_007215 (fadJ)
00380 Tryptophan metabolism
HF677_007215 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HF677_007215 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HF677_007215 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HF677_007215 (fadJ)
00930 Caprolactam degradation
HF677_007215 (fadJ)
Enzymes [BR:
cib01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HF677_007215 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HF677_007215 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HF677_007215 (fadJ)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
QKE19473
LinkDB
All DBs
Position
1530130..1532277
Genome browser
AA seq
715 aa
AA seq
DB search
MEMESAFTLNVRLDNVAVVTIDVPGEKMNTLKAEFASQVRVILKQIRDNKALRGVVFISA
KPDNFIAGADINMIGRCRSAQEAETLARQGQQIMADINALPIPVIAAIHGACLGGGLEMA
LACHNRICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQAL
KVGLVDEVVPHTILLEAAVELAKKDSPAHRTLPVRERVLAGPLGRALLFHMASKKTAQKT
QGNYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQSQALRHIFFANTDVKKDPG
SDVKPGPLNSVGILGGGLMGGGIAYVTACKGGLPVRIKDINAKGINHALKYSWDQLETKV
RRRHIKASERDKQLALISGSTDYRGFAHRDLVIEAVFEDLALKQQMVAEVEQNCASHTIF
ASNTSSLPIGDIAANAARPQQVIGLHFFSPVEKMPLVEVIPHATTSEQTIATTVKLAKKQ
GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEAIDAALVKFGFPVGPIQLLDEVG
IDTGTKIIPVLEAAYGERFSAPANVVASILNDDRKGRKNGRGFYLYGAKGRKSKKQVDPA
IYTLIGVQGQGRLTAAQIAERCVMLMLNEAARCFDEKIIRSARDGDIGAVFGIGFPPFLG
GPFRFMDSLGAGEVVAALQRLTTQYGSRFTPCEQLLQMAERGERFWSNEETDLNS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaatcggcttttacgctaaacgtacgtctggataacgtcgctgttgtcacc
attgatgtgcccggagagaaaatgaataccctgaaggcggaatttgcctcccaggttcgg
gtcattctgaaacaaattcgcgataacaaagcattacgcggcgtggtgttcatttcggcg
aaacccgataacttcattgccggggcggatatcaacatgattggtcgctgtcgcagcgcg
caggaagctgaaacgctggcacgccaggggcagcagattatggcggatattaatgccttg
ccgatccccgttatcgccgcaattcatggcgcctgtctcggcggtggcctggagatggcg
ctggcgtgccacaatcgtatttgtaccgatgatgctaaaaccgtactgggtttaccggaa
gtgcagcttggtctgctgcccggctctggcggtacccagcggttgccccgtctgattggc
gtcagtaccgcgctggatatgatcctcaccggaaaacaactacgcgcaaaacaggcgctg
aaagtgggtttagtggatgaagttgtaccgcataccattttgctggaagcggccgtagaa
ctggccaaaaaggacagtcccgcacaccgaactctgccggtgcgagagcgtgtgctagcg
gggccgctggggcgggcgctgttattccacatggccagtaaaaagacggcgcaaaaaacg
cagggcaactaccctgcaacagaacgtatccttgaggtcatcgaaaccggcttggcgcaa
ggcagcagcagcggttacgacgccgaagcccgcgcgtttggcgaactggcgatgacatct
cagtctcaggcgctgcggcacatcttttttgccaacaccgatgtgaaaaaggatcccgga
agtgatgtgaagcccggcccgctaaacagtgtaggcattttgggcggcggtctgatgggg
ggcggtattgcctatgtgacggcctgtaaaggcggcttgccagtgcgtatcaaagatata
aatgccaagggaatcaaccacgcgctgaagtacagctgggatcagcttgaaacgaaggtt
cgccgccgtcatatcaaagccagcgagcgtgataaacagctggcgctgatttcgggatca
accgattaccgtggcttcgctcatcgcgatctggttattgaagccgtatttgaagatctg
gcgttaaaacaacagatggtggcagaagttgagcaaaattgcgcatctcataccattttt
gcctctaacacctcatctttgccgattggcgatattgcggcgaacgctgccaggcctcaa
caagtaattggtttgcacttctttagcccagtggaaaaaatgccgctggtcgaggttatc
ccgcatgccacgacctctgagcagacaattgccacaaccgttaaactggcgaaaaagcag
ggcaaaacgccgatagtggtcagagataaggccggattttatgttaaccgcattttagcg
ccatacattaacgaagctattcgtatgctgaccgaaggcgagcgggttgaagccattgac
gccgcgctggttaagtttggttttccggtcgggccaatccaacttttggatgaggtcgga
attgatacgggcactaaaattataccagtgcttgaggctgcatatggagaacgttttagc
gcgcctgcaaatgttgttgcttcaattttgaatgacgatcgcaaaggtagaaaaaatggt
cggggtttctatctttatggagcgaaagggcgtaaaagcaaaaaacaggtcgaccctgca
atttatacgcttattggcgtccaggggcagggccgactcaccgctgcgcagatagccgag
cggtgcgtcatgttaatgctcaatgaagcagcacgctgttttgatgagaagattatccgc
agcgcgcgtgatggcgatatcggcgctgtatttggtattggttttccgcccttcctcggc
ggcccgttccggtttatggattcgctcggcgcgggtgaagtggttgctgctctgcaacga
ctgaccacgcaatacggctcgcggtttacgccgtgtgagcagttattgcagatggcggaa
cgtggtgaaagattctggagtaatgaggaaactgacctgaattcatga
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