Citrobacter sp. TSA-1: HF677_007925
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Entry
HF677_007925 CDS
T09275
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cib
Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cib03032
]
HF677_007925 (gyrA)
03400 DNA repair and recombination proteins [BR:
cib03400
]
HF677_007925 (gyrA)
Enzymes [BR:
cib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HF677_007925 (gyrA)
DNA replication proteins [BR:
cib03032
]
Prokaryotic type
DNA Topoisomerases
HF677_007925 (gyrA)
DNA repair and recombination proteins [BR:
cib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HF677_007925 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
ApbA
Motif
Other DBs
NCBI-ProteinID:
QKE19602
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Position
1667732..1670368
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AA seq
878 aa
AA seq
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MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMSKIAHELMADLEKETVDFVDNYDGTEQIPDVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV
YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALVARSWELGNV
SAMLERAGDDAARPEWLEPEFGVRDGQYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLEQIAELLHILGSADRLMEVIREEMELIREQFGDARRTEITANSADINIEDLISQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEANERITAILPVREYEEGVNVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKEGAVRPMGRTATG
VRGIKLAESDSVVSLIVPRGEGAILTVTQNGYGKRTAAEEYPTKSRATQGVISIKVTERN
GSVVGAVQVEDTDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAEDENVVGLQRVA
EPVDDEELDSIDGSAAEGDEDIAPEAESDDDAADDAEE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgcgagagaaattacaccggtcaacattgaggaagagctgaagagctcc
tatctggattatgcgatgtcggtcattgttggccgtgcgctgccggacgtccgagatggc
ctgaagccggttcaccgtcgcgtactttacgccatgaacgtattgggcaacgactggaat
aaagcctataaaaaatctgcccgtgtcgttggtgacgtaatcggtaaataccaccctcat
ggtgataccgccgtttacgacaccattgttcgtatggcgcagccattctccttgcgttac
atgctggtagatggtcagggtaactttggttctgtcgatggcgactccgcagcggcgatg
cgttatacggaaatccgtatgtcgaaaatcgcccatgagctgatggctgacctggaaaaa
gaaacggtggatttcgtcgataactacgacggcaccgaacaaattcctgacgtcatgcca
accaaaattcctaacctgctggtgaacggctcgtccggtatcgcggtaggtatggcgacc
aacattccgccgcacaacctgacggaagtgatcaacggctgcctggcatacattgacgat
gaagacatcagcattgaagggctgatggaacatattccgggtccggacttcccgaccgcc
gcgatcatcaacggtcgtcgtggtattgaagaagcctaccgtaccggccgtggcaaagtg
tacatccgcgcacgcgcggaagtcgaagcggatgccaaaactggccgtgaaaccatcatc
gtccatgaaattccgtatcaggtgaacaaagcgcgcctgatcgagaaaatcgccgagctg
gtaaaagacaaacgcgttgaaggtatcagcgcgctgcgtgacgagtctgacaaagacggt
atgcgcatcgtgattgaagtgaaacgcgacgcagtcggggaagtggttctgaacaacctc
tactcccagacccaactgcaggtttctttcggtatcaacatggttgcgttgcaccatgga
cagccgaaaatcatgaacctgaaagatattattgctgcgtttgtacgtcaccgccgtgaa
gtcgtaacccgccgtactatctttgaactgcgtaaagcccgcgaccgtgcgcacatcctt
gaagcactggcgattgcgctggcgaacatcgatccgatcatcgaactgatccgccgtgcg
ccgaccccggcagaagcgaaagcagcgctggtcgcgcgttcgtgggagctgggtaacgtt
tctgccatgttggaacgtgccggcgatgatgccgcgcgtcctgaatggctggaaccggaa
tttggcgtgcgtgacggtcagtactacctgactgaacagcaggcccaggccattctggat
ctgcgtttgcagaaactgaccggccttgagcacgaaaaactgctcgacgaatacaaagag
ctgctggagcagatcgctgaactgctgcacattctgggcagcgccgatcgtctgatggaa
gtcatccgtgaagagatggagctgattcgtgaacagttcggcgacgcacgtcggaccgaa
atcaccgcgaacagcgctgacatcaacatcgaagatctgattagccaggaagatgttgtc
gtgaccttgtctcatcaaggctacgtgaaatatcagccgttaaccgattacgaagcgcag
cgtcgtggcggtaaaggcaaatctgcagcacgaattaaagaagaagactttatcgaccgc
ctgctggtggctaacacccatgacacgatcctctgcttctccagccgcggtcgtttgtac
tggatgaaggtttatcagttgccggaagcaagccgtggtgcgcgtggacgtcctatcgtc
aacctgctgccactggaagctaacgaacgtatcaccgcaattctgccagtacgtgagtac
gaagaaggcgtcaacgtcttcatggcaaccgccagcggtaccgtgaagaaaacagcgctg
accgagttcagccgtccgcgttcagccggtatcattgcggttaacctgaacgaaggcgat
gagctgattggcgttgacctgacgtctggtagtgacgaagttatgctgttctctgctgcc
ggtaaagtggtgcgcttcaaagaaggggctgttcgtccgatgggacgtaccgcgaccggc
gtacgcggtatcaaactggcggaaagcgacagcgtggtatcgctgatcgttccgcgcggt
gaaggtgctatcctgaccgttacccagaacggctacggtaagcgtacggcggcggaagag
tatccgaccaagtctcgtgcgacccagggcgttatctccatcaaagtcaccgagcgcaac
ggttccgttgtcggcgcagtgcaggttgaagataccgaccagatcatgatgatcaccgat
gcaggtacgctggtgcgtactcgcgtgtcggaaatcagcgtggtaggacgtaacacccag
ggcgttatcctcatccgtactgcggaagatgaaaacgttgtgggtctgcaacgcgttgct
gaaccggttgatgatgaagagctcgactccatcgacggtagcgctgctgaaggggacgag
gatatcgcgcctgaagcggaaagcgatgacgatgcagcggacgacgctgaagagtaa
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