Citrobacter sp. TSA-1: HF677_008955
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Entry
HF677_008955 CDS
T09275
Symbol
mdtC
Name
(GenBank) multidrug efflux RND transporter permease subunit MdtC
KO
K07789
multidrug efflux pump
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HF677_008955 (mdtC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cib02000
]
HF677_008955 (mdtC)
Transporters [BR:
cib02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HF677_008955 (mdtC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Sde2_N_Ubi_yeast
Motif
Other DBs
NCBI-ProteinID:
QKE19795
LinkDB
All DBs
Position
complement(1887024..1890104)
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AA seq
1026 aa
AA seq
DB search
MKFFALFIHRPVATILISVAITLCGILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMA
SSVATPLERSLGRIAGVNEMTSSSSLGSTRIILEFKFDRDINGAARDVQAAINAAQSLLP
SGMPSRPTYRKANPSDAPIMILTLTSDTYSQGELYDFASTQLAQTIAQIDGVGDVDVGGS
SLPAVRVGLNPQALFNQGVSLDDVRSAIANANVRKPQGAIENDTHRWQVQTNDELKTAAE
YQPIIIHYNNGAAVRLGDVASVSDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSI
RAKLPELQTLVPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFVFLRSGRATL
IPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKP
LQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLLVSLT
LTPMMCGWMLKSSAPREQSRKRGFGRVLVALQQSYGTSLKWVLRHTRLVGVVLLGTIALN
IWLYISIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVNNVTGFTG
GSRVNSGMMFITLKPRDERGETAQQVIDRLRVALAKEPGANLFLMAVQDIRVGGRQANAS
YQYTLLSDDLAALREWEPKIRKALAALPQLADVNSDQQDNGAEMNLVYDRDTMSRLGIDV
AAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDRRYTQDISALDKMFVINNDGKAIPLSY
FAKWQPANAPLSVNHQGLSAASTVSFNLPTGSSLSEATEAINRTMTQLGVPSTVRGSFAG
TAQVFQDTMNSQVILIIAAIATVYIVLGMLYESYVHPLTILSTLPSAGVGALLALELFNA
PFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRNGKLQPEEAIFQACLLRFRPIMMTTLA
ALFGALPLVLSAGDGSELRQPLGITIVGGLVVSQLLTLYTTPVVYLFFDRLRLRFSRKNS
KPVAEL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttttcgcgcttttcattcatcgtccggtggcgaccattctcatttcggtggcc
atcaccctgtgcgggatactgggctttcgtctgctgccggtagctccgctgccgcaggtg
gatttcccggtgatcatggtcagcgcatcattaccgggcgcttcccctgaaacgatggcg
tcttcggtagccaccccgctggagcgctcactggggcgcatcgcgggcgtgaacgaaatg
acctcgagcagttcccttggcagtacgcgcattattcttgaattcaaattcgaccgtgac
atcaatggcgcggcgcgggatgttcaggccgcgattaacgcagcgcaaagcctgctaccc
agcggtatgccaagccgccccacgtaccgcaaagccaacccttccgatgcgccaatcatg
atcctgacgctcacgtcggacacttactcgcagggtgaactgtacgatttcgcatcaacc
caattagcacagaccatcgcgcaaatcgacggcgtgggtgacgtcgacgttgggggcagc
tctctgcctgccgtgcgcgtagggcttaatccgcaagcgctgtttaatcagggcgtgtcg
ctggacgacgtgcgtagcgcgattgctaacgccaatgtgcgtaagccgcagggagctatc
gagaatgatacccatcgctggcaggtacaaaccaacgatgagctgaaaaccgccgccgag
taccagccgattattatccactacaataacggcgctgcggtgcggctgggcgatgttgcg
tctgtgagcgactcggtgcaggacgtacgtaacgcggggatgaccaacgcaaaaccggct
atcctgctgatgatccgcaagctgccagaagccaatattattcaaacggtagacagcatt
cgggccaaattaccggagttacaaacgctggtcccggccgccatcgatctgcaaattgcc
caggatcgttcaccgaccattcgcgcctcgctggaggaagtcgaacagacgctgattatc
tccgttgcgctggttattctggtggtctttgttttcctgcgctccgggcgcgcgaccctg
atccctgcggtagcggttccggtctcgctgatcggtacctttgccgccatgtatctgtgc
gggttcagcctgaacaacctgtcattaatggcgttgaccattgccacgggatttgtcgtt
gatgacgcgatcgtggtgctggaaaatattgcccgccacctggaagcgggaatgaagcca
ctgcaggcggcgctacagggtacgcgcgaagtgggattcacggtgctctcaatgagcctg
tcgctggtagcggtgttcctcccgctgctgttaatgggcggattgcctgggcgcttgctg
cgcgaatttgccgtcacgctgtcagttgctatcggtatctcgctgctggtgtcgctgaca
ttaacgccaatgatgtgtggctggatgctcaaatccagcgccccgcgtgaacagtctcgt
aaacgaggttttggtcgtgtgctggtggcactgcaacagagttacggcacttcgcttaaa
tgggtgctgcgccatacgcgactggtaggcgtggtgttacttggcaccattgcgctgaat
atctggctttatatttccatccccaaaaccttcttcccggagcaggatacgggcgtgttg
atgggggggattcaggccgaccagagcatctctttccaggcgatgcgcggcaaactgcag
gactttatgaagatcatccgcgacgacccggcggtgaataacgtcaccggttttaccggc
ggttcccgggttaacagcgggatgatgtttatcaccctcaagccacgcgatgagcgcggt
gaaaccgctcagcaggtgatcgaccgcctgcgcgtcgcgcttgcaaaagagcctggcgcg
aatctgtttctgatggcggtgcaggatattcgcgtcggcggtcgccaggccaatgccagc
tatcaatacacattgctttccgacgatctggcggcgctgcgcgagtgggaaccgaagatc
cgtaaggcgcttgccgccctgccccaactggcggatgtcaactccgatcagcaggacaat
ggcgcggaaatgaacctggtctacgatcgcgacaccatgtctcgtctggggatcgacgtt
gcagccgctaacagcctgttgaacaacgcttttggacaacggcaaatttcaactatttat
caaccgatgaaccagtacaaagtggtgatggaggtcgatcgacgttacacccaggacatc
agcgcgctggataaaatgttcgtcatcaacaatgacggtaaggcaatcccgctatcgtac
tttgccaaatggcaaccggcgaatgccccgctgtcggtaaaccatcagggcttgtccgct
gcctcaaccgtgtcgtttaacctgccaacaggttcttcactgtctgaggcgacagaggct
atcaacagaaccatgacccagctcggcgtcccctccacagttcgcggtagctttgccggc
acggcacaggtatttcaggacaccatgaactcacaggtgatcctgattatcgccgccatc
gccacggtctacatcgttctgggtatgctgtatgaaagctatgttcatcccctgaccatt
ctctccacgctaccttcagctggcgtcggggctttgctggcgctggagctgttcaatgcc
ccgttcagcctaatcgccctgatagggataatgctattaattggcattgtgaagaaaaat
gccatcatgatggtcgattttgcgctggaagcgcagagaaacggcaagctgcagccagaa
gaagccattttccaggcctgcctgctgcgctttcgcccaatcatgatgaccacgctggcg
gcgttgtttggcgcgctgccgctggtgttatccgccggggatggctctgaactacgtcaa
cctttggggataaccattgtcggcgggctggtcgtgagtcaactcctgacactgtacacc
acgcccgtggtctatctctttttcgaccgtctgcgtctgcgtttttcgcgtaaaaacagc
aaaccggtagcagagttatga
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