KEGG   Citrobacter sp. TSA-1: HF677_008955
Entry
HF677_008955      CDS       T09275                                 
Symbol
mdtC
Name
(GenBank) multidrug efflux RND transporter permease subunit MdtC
  KO
K07789  multidrug efflux pump
Organism
cib  Citrobacter sp. TSA-1
Pathway
cib02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cib00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HF677_008955 (mdtC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cib02000]
    HF677_008955 (mdtC)
Transporters [BR:cib02000]
 Other transporters
  Electrochemical potential-driven transporters [TC:2]
   HF677_008955 (mdtC)
SSDB
Motif
Pfam: ACR_tran MMPL SecD_SecF_C Sde2_N_Ubi_yeast
Other DBs
NCBI-ProteinID: QKE19795
LinkDB
Position
complement(1887024..1890104)
AA seq 1026 aa
MKFFALFIHRPVATILISVAITLCGILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMA
SSVATPLERSLGRIAGVNEMTSSSSLGSTRIILEFKFDRDINGAARDVQAAINAAQSLLP
SGMPSRPTYRKANPSDAPIMILTLTSDTYSQGELYDFASTQLAQTIAQIDGVGDVDVGGS
SLPAVRVGLNPQALFNQGVSLDDVRSAIANANVRKPQGAIENDTHRWQVQTNDELKTAAE
YQPIIIHYNNGAAVRLGDVASVSDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSI
RAKLPELQTLVPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFVFLRSGRATL
IPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKP
LQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLLVSLT
LTPMMCGWMLKSSAPREQSRKRGFGRVLVALQQSYGTSLKWVLRHTRLVGVVLLGTIALN
IWLYISIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVNNVTGFTG
GSRVNSGMMFITLKPRDERGETAQQVIDRLRVALAKEPGANLFLMAVQDIRVGGRQANAS
YQYTLLSDDLAALREWEPKIRKALAALPQLADVNSDQQDNGAEMNLVYDRDTMSRLGIDV
AAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDRRYTQDISALDKMFVINNDGKAIPLSY
FAKWQPANAPLSVNHQGLSAASTVSFNLPTGSSLSEATEAINRTMTQLGVPSTVRGSFAG
TAQVFQDTMNSQVILIIAAIATVYIVLGMLYESYVHPLTILSTLPSAGVGALLALELFNA
PFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRNGKLQPEEAIFQACLLRFRPIMMTTLA
ALFGALPLVLSAGDGSELRQPLGITIVGGLVVSQLLTLYTTPVVYLFFDRLRLRFSRKNS
KPVAEL
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgaaatttttcgcgcttttcattcatcgtccggtggcgaccattctcatttcggtggcc
atcaccctgtgcgggatactgggctttcgtctgctgccggtagctccgctgccgcaggtg
gatttcccggtgatcatggtcagcgcatcattaccgggcgcttcccctgaaacgatggcg
tcttcggtagccaccccgctggagcgctcactggggcgcatcgcgggcgtgaacgaaatg
acctcgagcagttcccttggcagtacgcgcattattcttgaattcaaattcgaccgtgac
atcaatggcgcggcgcgggatgttcaggccgcgattaacgcagcgcaaagcctgctaccc
agcggtatgccaagccgccccacgtaccgcaaagccaacccttccgatgcgccaatcatg
atcctgacgctcacgtcggacacttactcgcagggtgaactgtacgatttcgcatcaacc
caattagcacagaccatcgcgcaaatcgacggcgtgggtgacgtcgacgttgggggcagc
tctctgcctgccgtgcgcgtagggcttaatccgcaagcgctgtttaatcagggcgtgtcg
ctggacgacgtgcgtagcgcgattgctaacgccaatgtgcgtaagccgcagggagctatc
gagaatgatacccatcgctggcaggtacaaaccaacgatgagctgaaaaccgccgccgag
taccagccgattattatccactacaataacggcgctgcggtgcggctgggcgatgttgcg
tctgtgagcgactcggtgcaggacgtacgtaacgcggggatgaccaacgcaaaaccggct
atcctgctgatgatccgcaagctgccagaagccaatattattcaaacggtagacagcatt
cgggccaaattaccggagttacaaacgctggtcccggccgccatcgatctgcaaattgcc
caggatcgttcaccgaccattcgcgcctcgctggaggaagtcgaacagacgctgattatc
tccgttgcgctggttattctggtggtctttgttttcctgcgctccgggcgcgcgaccctg
atccctgcggtagcggttccggtctcgctgatcggtacctttgccgccatgtatctgtgc
gggttcagcctgaacaacctgtcattaatggcgttgaccattgccacgggatttgtcgtt
gatgacgcgatcgtggtgctggaaaatattgcccgccacctggaagcgggaatgaagcca
ctgcaggcggcgctacagggtacgcgcgaagtgggattcacggtgctctcaatgagcctg
tcgctggtagcggtgttcctcccgctgctgttaatgggcggattgcctgggcgcttgctg
cgcgaatttgccgtcacgctgtcagttgctatcggtatctcgctgctggtgtcgctgaca
ttaacgccaatgatgtgtggctggatgctcaaatccagcgccccgcgtgaacagtctcgt
aaacgaggttttggtcgtgtgctggtggcactgcaacagagttacggcacttcgcttaaa
tgggtgctgcgccatacgcgactggtaggcgtggtgttacttggcaccattgcgctgaat
atctggctttatatttccatccccaaaaccttcttcccggagcaggatacgggcgtgttg
atgggggggattcaggccgaccagagcatctctttccaggcgatgcgcggcaaactgcag
gactttatgaagatcatccgcgacgacccggcggtgaataacgtcaccggttttaccggc
ggttcccgggttaacagcgggatgatgtttatcaccctcaagccacgcgatgagcgcggt
gaaaccgctcagcaggtgatcgaccgcctgcgcgtcgcgcttgcaaaagagcctggcgcg
aatctgtttctgatggcggtgcaggatattcgcgtcggcggtcgccaggccaatgccagc
tatcaatacacattgctttccgacgatctggcggcgctgcgcgagtgggaaccgaagatc
cgtaaggcgcttgccgccctgccccaactggcggatgtcaactccgatcagcaggacaat
ggcgcggaaatgaacctggtctacgatcgcgacaccatgtctcgtctggggatcgacgtt
gcagccgctaacagcctgttgaacaacgcttttggacaacggcaaatttcaactatttat
caaccgatgaaccagtacaaagtggtgatggaggtcgatcgacgttacacccaggacatc
agcgcgctggataaaatgttcgtcatcaacaatgacggtaaggcaatcccgctatcgtac
tttgccaaatggcaaccggcgaatgccccgctgtcggtaaaccatcagggcttgtccgct
gcctcaaccgtgtcgtttaacctgccaacaggttcttcactgtctgaggcgacagaggct
atcaacagaaccatgacccagctcggcgtcccctccacagttcgcggtagctttgccggc
acggcacaggtatttcaggacaccatgaactcacaggtgatcctgattatcgccgccatc
gccacggtctacatcgttctgggtatgctgtatgaaagctatgttcatcccctgaccatt
ctctccacgctaccttcagctggcgtcggggctttgctggcgctggagctgttcaatgcc
ccgttcagcctaatcgccctgatagggataatgctattaattggcattgtgaagaaaaat
gccatcatgatggtcgattttgcgctggaagcgcagagaaacggcaagctgcagccagaa
gaagccattttccaggcctgcctgctgcgctttcgcccaatcatgatgaccacgctggcg
gcgttgtttggcgcgctgccgctggtgttatccgccggggatggctctgaactacgtcaa
cctttggggataaccattgtcggcgggctggtcgtgagtcaactcctgacactgtacacc
acgcccgtggtctatctctttttcgaccgtctgcgtctgcgtttttcgcgtaaaaacagc
aaaccggtagcagagttatga

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