Citrobacter sp. TSA-1: HF677_008960
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Entry
HF677_008960 CDS
T09275
Name
(GenBank) MdtB/MuxB family multidrug efflux RND transporter permease subunit
KO
K07788
multidrug efflux pump
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HF677_008960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cib02000
]
HF677_008960
Transporters [BR:
cib02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HF677_008960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QKE19796
LinkDB
All DBs
Position
complement(1890105..1893227)
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AA seq
1040 aa
AA seq
DB search
MQVLPPHNTGGPSRLFILRPVATTLLMVAILLAGIIGYRFLPIAALPEVDYPTIQVVTLY
PGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVVTLQFQLTLPLDVAEQEVQAA
INAATNLLPGDLPNPPVYSKVNPADPPIMTLAVTSSAMPMTQVEDMVETRVAQKISQVSG
VGLVTLSGGQRPAVRVKLNAQAIAALGLTSETIRTAITGANVNSAKGSLDGPTRAVTLSA
NDQMQSADEYRQLIVAYKNGAPVRLGDVATVEQGAENSWLGAWANKQQAIVMNVQRQPGA
NIISTADSIRQMLPQLTESLPKSVKVSVLSDRTTNIRASVADTQFELMLAIALVVMIIYL
FLRNIPATIIPAVAVPLSLIGTFAVMVFLDFSINNLTLMALTIATGFVVDDAIVVIENIS
RYIEKGEKPLTAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAVTLAVAI
LISAVVSLTLTPMMCARMLNQASLRKQNRFSRASERMFDRVIAGYGHWLAKVLNHPWLTL
GVAFGTLALSVMLWVFIPKGFFPIQDNGIIQGTLQAPQSSSFASMAQRQRQVSDVILQDP
AVESLTAFVGVDGTNPALNSARLQINLKPLDDRDDRVQKVIARLQDAVDRVPGVDLYLQP
TQDLTIDTQVSRTQYQFTLQATSLDALSTWVPQLLEKLHQLPQLSDVSSDWQDKGLVAYV
NVNRDSASRLGISMADVDNALYNAFGQRLISTIYTQANQYRVVLEHDTNSTPGLAALDTI
RLTSSDGGVVPLSAIASIEQRFAPLSINHLDQFPVTTISFNVPDGHSLGDAVQAILDAEK
TLNLPANITTQFQGSTLAFQAALGNTIWLIVAAVVAMYIVLGVLYESFIHPITILSTLPT
AGVGALLALMIAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMTPRDAIFQA
CLLRFRPILMTTLAALLGALPLMLSTGVGAELRRPLGIGMVGGLLVSQVLTLFTTPVIYL
LFDRLSLYVKSRFPRQEEEA
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgttacctccgcacaacacaggcgggccatcacgcctgtttattctgcgacct
gtcgccaccacgctgctgatggtcgcgattttgcttgccggtattatcggttatcgtttc
ctgccgatcgctgccttaccggaagtcgattaccccacgattcaggtcgttacgctgtac
ccgggcgccagcccggacgtcatgacctcggcggtaaccgcaccacttgagcgtcagttc
ggacagatgtccggcttaaaacagatgtcctcgcaaagttccggcggcgcatcggtcgtc
acgttgcagtttcaactgacgctgccgttggatgttgccgagcaggaagttcaggctgcg
attaacgccgccaccaatttattaccgggcgatctgcccaatccgccagtctacagcaag
gtaaacccggcagatccaccgatcatgacgctggcggtcacgtccagcgccatgccgatg
acgcaggtggaagatatggtcgaaacccgcgtcgcgcagaaaatctctcaggtttccggt
gtcggtctggtaacactttccggcgggcaacgaccggcggtccgcgtgaagcttaacgca
caggctattgccgcactcggtctgaccagcgaaaccatccgtacagccattaccggggct
aacgtcaattcggcaaaagggagtcttgatggcccaacgcgtgctgtcaccctttccgcc
aacgaccagatgcagtccgcagacgaatatcgccagctcatcgtggcctataaaaacggt
gcaccggttcgtctgggcgatgtcgccaccgtcgaacaaggggcagaaaatagctggctg
ggcgcatgggccaataagcaacaagccattgtaatgaatgttcagcgccagcctggggcg
aacatcatctccacggcagacagtatccgtcaaatgctgccgcagctcaccgaaagcctg
cccaaatcagttaaggtcagcgtgctttcggatcgtacgaccaatattcgtgcctccgtt
gcagacacccagtttgagctaatgctggcgattgcgctggtggtgatgatcatctacctg
ttcctgcgcaatattccggcgacgattattcctgcggtcgccgttccgctgtcgctcatc
ggcaccttcgcggtgatggtatttcttgatttctccatcaataacctgaccctaatggcg
ctaaccatcgcgacaggattcgtagtggatgacgctatcgtggttatcgagaatatttct
cgctatatcgaaaaaggcgaaaaaccgctgactgccgccctgaagggggctggtgagatt
ggttttaccatcatctctctgacattttcgctaattgccgtgctgatcccgctgttgttt
atgggtgatatcgttggccgattattccgcgagtttgccgttacgctggccgtggcaatt
ctgatttccgccgtcgtctcgctcaccctcacgccgatgatgtgcgcgcgcatgcttaat
caggcctcgttgcgtaagcaaaaccgcttctcccgcgcctcggagcgtatgttcgatcgc
gtcattgccgggtacggtcactggctggcaaaagtgctgaaccatccgtggctcacgctg
ggcgtggcgttcggcacgctggcactgagcgttatgttatgggtctttatccccaaaggg
ttcttcccgatccaggacaacggcatcatccagggtacgctgcaggcgccgcagtccagt
tcatttgccagcatggcccagcgccagcgccaggtttccgatgtcatccttcaagatccg
gcggtcgagagcctgaccgcttttgtcggcgtggatggtactaatccggcattgaacagc
gcgcgtctgcaaatcaaccttaagccgctggacgatcgcgacgatcgcgtgcagaaagtg
atcgcacgcctacaggacgcggttgacagagtacccggcgttgatctctatcttcagccc
acccaggacctgacgattgatacccaggtcagccggacgcaatatcagtttacgctgcaa
gcaacgtcccttgacgccctcagcacctgggttccacagctgttagaaaaacttcaccag
ctaccgcaactgtccgatgtcagtagcgactggcaggacaaagggctggtggcgtatgtg
aacgtcaatcgcgatagcgccagccgtttaggcatcagcatggcggatgtcgataacgcc
ctgtacaacgccttcggccagcgactgatttcaaccatctacacccaggccaaccagtat
cgcgtcgtattggaacatgacaccaacagtacgccggggcttgctgcactggacactatc
cgtctgaccagcagcgacggcggcgtggttccacttagcgcaatcgccagcattgaacag
cgtttcgctccgctgtcgattaaccacctcgatcagttcccggtcaccaccatctcgttc
aacgtaccggacggtcattcgctgggcgatgcggtgcaggcaattctggatgccgaaaaa
acgctcaatctgccagcaaatattaccacccagttccagggcagtacgctcgctttccag
gccgcactgggtaataccatctggttgattgtggctgcggttgtcgcgatgtatatcgtc
ctcggcgtgctgtatgagagctttattcacccgattaccattctctccacgctacccacg
gcgggcgtcggcgccctcctggcgttaatgattgccggcagtgaactggacgtcatcgcg
attatcggcattattttgcttatcggtatcgtcaagaaaaacgccatcatgatgatcgac
ttcgcccttgccgcggagcgcgaacagggcatgaccccacgcgacgctattttccaggcc
tgtctgctgcgttttcgcccgattctgatgactacgctggcggcactgctcggcgcgttg
ccgctgatgttaagtaccggcgtgggggccgaattacgtcgtccattaggaattggtatg
gtcggcggtctgctggtaagccaggtattaaccctgtttaccaccccggtgatttatctg
ctgtttgaccgtctgtcgctgtacgtgaaaagccgcttcccgcgtcaggaagaggaagcg
taa
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