Citrobacter sp. TSA-1: HF677_009055
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Entry
HF677_009055 CDS
T09275
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib00051
Fructose and mannose metabolism
cib00541
Biosynthesis of various nucleotide sugars
cib01100
Metabolic pathways
cib01250
Biosynthesis of nucleotide sugars
Module
cib_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
HF677_009055 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HF677_009055 (gmd)
Enzymes [BR:
cib01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
HF677_009055 (gmd)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
Glyco_transf_4
adh_short
NmrA
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
QKE19814
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Position
1915311..1916432
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AA seq
373 aa
AA seq
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MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHSGNPKFHL
HYGDLTDSSNLTRILQEVQPDEVYNLGAMSHVAVSFDSPEYTADVDAIGTLRLLEAIRFL
GLEKKTRFYQASTSELYGLVQEIPQKESTPFYPRSPYAVAKLYAYWITVNYRESYGMYAC
NGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQWMM
LQQDKPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGEGVNEKGIVVSVTGHDAPGVKP
GDVMIAVDPRYFRPAEVETLLGDPAKAHEKLGWKPEITLRQMISEMVANDLEAAKKHSLL
KSHGYEVAIALEY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagtcgctctcatcactggcgtaaccgggcaggatggttcttacctggcagag
ttcctgctggaaaaagggtatgaagtacacggtattaagcgccgcgcttcatcattcaac
accgaacgagtggaccacatctatcaggatccgcattcgggcaatcccaaattccatctg
cactatggtgatttgacggactcctccaacctgacccgtattttacaggaagtgcaaccg
gatgaggtctataacctcggcgccatgagtcatgtcgcggtgtcgtttgattcaccggaa
tacaccgcggatgtcgatgctatcggcaccttgcgtttgctggaagctatccgcttcctc
ggcctggaaaagaagacccgtttttatcaggcttccacctctgaactttacggcctggta
caggaaatcccgcagaaagagagcacgccgttctacccgcgctcgccgtatgccgttgcc
aagctgtacgcctactggataaccgtcaactaccgcgaatcttacggtatgtatgcctgt
aacggcattctgtttaaccacgaatctccgcgccgcggcgaaacctttgtcacgcgcaaa
attacgcgtgcgatcgccaacatcgcgcaggggctggagtcttgtctgtacctgggcaat
atggattcgctgcgtgactgggggcatgccaaagattacgtcaggatgcagtggatgatg
ctgcagcaggacaagccggaagatttcgtgattgccaccggcgtgcagtattccgtgcgc
cagtttgtggaaatggccgccgctcagttggggattaaattgcgctttgaaggcgagggc
gtgaatgagaaaggcatcgtggtttccgtaaccggacacgacgcgccgggtgtgaaacct
ggggatgtcatgattgccgtcgatccgcgctatttccgtccggcagaggtggaaacgcta
ttgggcgatccggccaaagcacatgaaaaactgggctggaagccggaaatcacgttgcgc
cagatgatctcggaaatggttgccaacgatcttgaagcagcgaagaagcattccctgctg
aagtcgcacggttacgaggtcgccatcgcgctggagtactga
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