Citrobacter sp. TSA-1: HF677_010105
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Entry
HF677_010105 CDS
T09275
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HF677_010105 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cib01007
]
HF677_010105 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cib03016
]
HF677_010105 (aspS)
03029 Mitochondrial biogenesis [BR:
cib03029
]
HF677_010105 (aspS)
Enzymes [BR:
cib01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HF677_010105 (aspS)
Amino acid related enzymes [BR:
cib01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HF677_010105 (aspS)
Transfer RNA biogenesis [BR:
cib03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HF677_010105 (aspS)
Prokaryotic type
Other AARSs
HF677_010105 (aspS)
Mitochondrial biogenesis [BR:
cib03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HF677_010105 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QKE20003
LinkDB
All DBs
Position
2119243..2121015
Genome browser
AA seq
590 aa
AA seq
DB search
MRTEYCGQLRLSHEGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPNRADALKLA
SELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASDLTIINRSDSLPLDSNHVNTEEA
RLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPS
RVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMT
APQVREVMEALVRNLWLEVKGVDLGDFPIMTFAEAERRYGSDKPDLRNPMELVDVADLVK
GVEFAVFSGPANDAKGRVAALRVPGGASLSRKQIDDYGNFIKIYGAKGLAYIKVTERAKG
LEGITSPVAKFLNAEIVDAILERTGAQDGDMIFFGADNKKVVADAMGALRLKLGKDLNIT
DEAKWAPLWVIDFPMFEDDGEGGLTAMHHPFTAPKDMTAAELKAAPEDAVANAYDMVING
YEVGGGSVRIHNGDMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGLDRLTM
LLTGTDNIRDVIAFPKTTAAACLMTEAPSFANEAALAELSIQVVKKAENN
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacagaatattgcggacagctacgtctgtcccacgaggggcagcaggtgactctg
tgtggttgggtcaaccgtcgtcgtgatcttggtagcctgatctttatcgatatgcgcgac
cgcgaaggtatcgtgcaggtatttttcgatccgaaccgtgcggatgcgttaaagctggcc
tccgaactgcgtaatgagttctgtatccaggttacgggcaccgtgcgtgcgcgtgacgcg
aaaaacgtcaacgccgatatggcgactggcgaaattgaagtgctggcctccgatctgacc
atcatcaaccgttcagactcgctgccgctggactctaaccatgtaaacaccgaagaagcg
cgactgaagtatcgctacctggatctgcgtcgccctgaaatggcgcagcgcctgaaaacg
cgtgccaaaattaccagcctggtgcgtcgttttatggacgatcacggcttcctcgacatc
gaaactccgatgctgaccaaagctacgccggaaggcgcgcgcgattacctggttccttct
cgtgttcataaaggtaagttctacgcgctgccgcagtctcctcagctgtttaaacagctg
ctgatgatgtccggttttgaccgctactatcagatcgtaaaatgcttccgtgatgaagac
ttacgtgctgaccgtcagcctgaatttactcagatcgacgttgagacttccttcatgacc
gcgccgcaggtgcgtgaagtgatggaagcgctggtgcgtaacctgtggctggaagttaaa
ggtgtggatctgggtgatttcccgatcatgacctttgccgaagccgagcgtcgttacggt
tctgataaaccagacctgcgtaacccgatggaactggttgacgttgccgatctggtgaaa
ggcgttgagttcgccgtgttctctggtccggcgaacgatgcgaaaggccgcgtggctgcc
ctgcgtgtaccgggcggtgcgagcttaagccgtaagcagatcgacgattacggtaacttt
attaagatttacggcgcgaaaggtctggcttacatcaaagtcaccgagcgtgcgaaaggc
ctggaaggcatcaccagcccggttgctaagttcctgaacgcagaaatcgtagacgcgatt
ctggagcgtaccggtgcgcaagacggcgacatgattttcttcggtgccgacaacaagaaa
gtggtggccgacgcgatgggcgcgctgcgtctgaaactgggcaaagacctgaacattacc
gacgaagccaaatgggcgccgctgtgggttatcgacttcccgatgtttgaagacgatggt
gaaggcgggctgaccgcgatgcaccacccgttcaccgcgccaaaagacatgactgccgct
gagctgaaagctgcgccggaagacgcggttgccaacgcgtacgatatggtcatcaacggc
tatgaagtgggcggtggttccgtgcgtattcacaacggtgatatgcagcagaccgtattc
ggtattctgggcattaacgagcaagaacagcgcgagaaattcggcttcctgctggatgcg
ctaaaatacggtacaccgccgcatgcgggcctggcgtttggtctggatcgcttgacgatg
ctgctgaccggtactgacaacattcgtgacgttattgccttcccgaaaaccaccgctgca
gcgtgtctgatgactgaagcgccaagctttgccaacgaagccgcgctggcggaactgagc
attcaggttgttaagaaggctgagaataactga
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