Citrobacter sp. TSA-1: HF677_010130
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Entry
HF677_010130 CDS
T09275
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HF677_010130 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cib03400
]
HF677_010130 (ruvB)
Enzymes [BR:
cib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HF677_010130 (ruvB)
DNA repair and recombination proteins [BR:
cib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HF677_010130 (ruvB)
RecFOR pathway proteins
HF677_010130 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
Rad17
AAA_14
nSTAND3
AAA_16
TIP49
AAA_2
AAA_18
RNA_helicase
AAA_17
Bac_DnaA
NTPase_1
ABC_tran
AAA_24
AAA_28
NB-ARC
TsaE
DUF4129
NPHP3_N
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
QKE20008
LinkDB
All DBs
Position
2123489..2124499
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AA seq
336 aa
AA seq
DB search
MIEADRLISAVSTTPEDLVDRAIRPKLLEEYIGQPQVRSQMEIFIQAAKLRGEALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYQVADLQHIVGRSARFMGLEMSDEGALEVARRARGTPRIANRLLRRVRDFSEVKHDG
TISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDV
LEPYLIQQGFLQRTPRGRMATVRAWNHFGITPPEMP
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcagatcgcctgatttcggctgtcagcacgacccctgaagatctggtggat
cgcgcgatccgccccaaattgctggaagagtatattggccagcctcaggtgcgttcgcaa
atggagatttttatccaggcggcgaagctgcgcggtgaagccctcgatcacctgctgatt
ttcggtcctccaggtctcggtaaaaccacgcttgccaatattgttgccaatgaaatgggc
gttaatctgcgcaccacttccggtccggtactggaaaaagcgggcgatctggcggcaatg
ctcaccaaccttgaaccgcacgatgtgctgtttatcgatgaaatccatcgcctgtcaccg
gtggtggaagaggtgctgtatccggcgatggaagattatcagctggatatcatgattggc
gaaggaccagccgcacgttcgattaagatcgatctgccgccgtttaccctgatcggggcg
acgacgcgcgccggttcgttaacgtctccgctgcgtgaccgcttcggtattgtacagcgc
ctggaattctatcaggtggcagacctgcagcacattgttggacgcagcgcccgctttatg
ggactggaaatgagcgatgaaggcgcattggaagtggcacgccgcgcccgtggtacgccg
cgtatcgccaaccgtttattacgccgggtacgcgacttctccgaagtgaagcatgacggc
acaatttcagcagatatcgccgctcaggcactggatatgctcaatgtggatgcggaagga
ttcgattatatggaccgtaagctgctgctggcggttatcgataaattcttcggcggaccg
gtaggactggataacctggcggcggcgattggggaagagcgtgaaaccattgaggacgtg
ctggagccgtatctgattcagcaaggttttctgcagcgaactccgcgcggacgtatggca
acggtgcgggcgtggaaccactttggcattacaccgccggaaatgccataa
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