Citrobacter sp. TSA-1: HF677_011865
Help
Entry
HF677_011865 CDS
T09275
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
cib
Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cib03000
]
HF677_011865
Transcription factors [BR:
cib03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HF677_011865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
QKE20327
LinkDB
All DBs
Position
2488058..2488948
Genome browser
AA seq
296 aa
AA seq
DB search
MGMSIKQLRAFLAVAHTLNFAHASERLNMSQPALSLAIKGLEDSLGGALLLRTTRKVTLT
QEGETLLNMGRQLLADWENTEEAMRQRFTLQRGKISIAAMPSFAANVLPSVLKTFRDSYS
GINVTVHDVINEQVIEMVSEGRVEMGIAFEPDSSGHLHFTPLGVDRFIAIVPPTCKLAGR
DRIAWRELLTLDFITLQRPSAVRLMLEEQLVQSGHTLEVALESHQLVTVGRLVASGLGGS
AVPALCRTQMTELGATCIDLDTPVIQRRIGVLRSAHHKLSTASEVLVDSLKKAYCT
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgagcatcaaacagttacgcgcgtttttagcggtagctcacactctgaatttt
gctcatgccagtgaaagactgaatatgtcgcaacccgctttaagcctggcgattaaagga
ctggaggattcactgggcggggcgttactgttgagaaccacccgcaaagtgaccctgacg
caggagggagaaacgctgctcaacatggggcgacaactgctggcggactgggagaatacg
gaagaggcaatgcgccagcgctttacgctgcagcgcgggaaaatctctattgccgccatg
ccctcattcgccgctaacgtcctgccatcggtactgaaaacgtttcgtgattcctactcc
gggatcaacgtaacggtacatgacgtcattaacgaacaagtgattgagatggtcagtgaa
gggcgggtggagatgggcattgcctttgagccggactcttcagggcatctgcatttcacc
ccgctcggcgtggatcgttttatcgcgattgttccgccgacatgcaaactggcgggccgg
gatcgtattgcgtggcgcgaattgctgacgctggattttatcaccctgcaacgtccttct
gccgtgcgcctgatgctggaagaacagctggtgcaaagtgggcatacgctggaggtggcg
ctggagagccatcaacttgtgacggttggtcgcctggtggcaagtggactgggcggcagc
gccgtgcccgcattgtgccgtacgcaaatgacagagctgggcgcaacctgtatcgatctg
gatacgccggtgatccagcgtcggatcggcgttttgcgttcggcgcatcataagttatct
accgcttctgaagtgctggtggattcactgaaaaaggcgtattgcacctga
DBGET
integrated database retrieval system
