Citrobacter sp. TSA-1: HF677_013560
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Entry
HF677_013560 CDS
T09275
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K25495
AraC family transcriptional regulator, regulator of nimT
Organism
cib
Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cib03000
]
HF677_013560
Transcription factors [BR:
cib03000
]
Prokaryotic type
Helix-turn-helix
AraC family
HF677_013560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
EAD2
HTH_23
HTH_29
Pkinase_fungal
RDD
Motif
Other DBs
NCBI-ProteinID:
QKE20640
LinkDB
All DBs
Position
complement(2832475..2833293)
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AA seq
272 aa
AA seq
DB search
MLGLRLDGYEPDLYHDAAVAFCIQAREDELFSPLHQHRKGQLILALHGAITCEVENAMWM
VPPQYAVWIPGEIPHSNHVTVGAQLCFLFIEPQAVVMPERCCTLKIAPLCRELILALASK
TDDQRLEPSTQRLTQVLFDELPQQPQEQMQLPVSDHPKIRRMVATMAREPAQWQTLGQWA
SVFAMSERNLARLVVKETGLSFRRWRHQLQLILALQALIDGHNVQQVAQMLGYDSTTAFI
TMFKKGLGQTPGRYLAGLATASQQSMTPDLPQ
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgttaggactgaggctggatgggtatgagcccgacctttaccacgatgcggcggtggcg
ttttgtatacaggcccgggaagatgaactcttcagtccgctgcatcagcaccgtaagggg
cagttgattctggccttgcatggcgcgatcacctgtgaggttgaaaatgccatgtggatg
gtgcctccacaatatgcggtatggatccccggtgaaattccacacagcaatcacgttacc
gttggggcgcaactgtgctttttgtttattgagccgcaggcagtagtgatgcctgaacgc
tgctgcaccctgaaaatcgccccattatgtcgggagctcattctggcgctggcgtccaaa
acggatgatcaacggctggagccgtctacccagcggctgacacaagtgctatttgatgaa
ctcccgcagcagccgcaggagcaaatgcagttgccggtttccgatcacccgaaaatccgc
agaatggtcgcgacgatggcgcgggagcccgcgcagtggcagacgctgggacagtgggcc
agcgtatttgcgatgagtgagcggaacctcgcccgtctggtcgttaaagagacggggttg
agttttcgccgctggcgtcaccagcttcaattgattctggcgctgcaggcgctgatagat
ggtcataacgtgcaacaggttgcgcaaatgctcggttacgattcgaccacggcatttatc
accatgttcaaaaaaggcctgggacagactccaggccgttatctggctggactggctact
gcttcccaacaatcaatgacaccagacctgccgcaatga
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