Citrobacter sp. TSA-1: HF677_014450
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Entry
HF677_014450 CDS
T09275
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib03030
DNA replication
cib03430
Mismatch repair
cib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HF677_014450 (holB)
03430 Mismatch repair
HF677_014450 (holB)
03440 Homologous recombination
HF677_014450 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cib03032
]
HF677_014450 (holB)
03400 DNA repair and recombination proteins [BR:
cib03400
]
HF677_014450 (holB)
Enzymes [BR:
cib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HF677_014450 (holB)
DNA replication proteins [BR:
cib03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HF677_014450 (holB)
DNA repair and recombination proteins [BR:
cib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HF677_014450 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
EPF
Motif
Other DBs
NCBI-ProteinID:
QKE20796
LinkDB
All DBs
Position
complement(2998792..2999796)
Genome browser
AA seq
334 aa
AA seq
DB search
MKWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLMCQQPEGHKSCG
HCRGCQLMQAGTHPDYYSLLPEKGKSTLGVDAVREVSEKLYEHSRLGGAKVVWIPDAAQL
TDAAANALLKTLEEPPAQTWFFLASTEPARLLATLRSRCRLHHLAPPAESYAISWLAREV
TASPEALLSALRLSAGSPGAALSLLQAESWAHRTDFCAALANTLNAGDWYILLAALNHDQ
AAARLHWLATLLTDALKRPYGVSHLTNPDALDLISSIAERLSVARIQAILGDVCHCRQQL
LNVTGVNRELVLTDLILRIEHYLQPGTVLPVPHL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtacccatggttacggccagattttgaaaaactggtagctagctaccaggcg
ggtcgtggtcaccatgcgttactgattcaggcgttacccggaatgggtgacgacgcgctg
atttacgcgctcagtcgctatttaatgtgccagcagccggaagggcataaaagctgcgga
cactgccggggctgtcaattgatgcaggcggggacgcatcctgattactattcgctgctg
ccggaaaaaggcaaaagcacgctgggggttgatgcggtacgtgaagtgagtgaaaagctg
tacgagcattcacgccttggcggtgcgaaagtggtgtggatccctgatgccgcccagtta
actgatgctgctgccaatgctctgctaaaaacgctggaagaaccgccggcacaaacctgg
tttttcctcgccagcacagagcctgcgcgattgctggcgacattgcgcagccgctgccgg
ttacaccatcttgcgccgccggctgagtcgtacgctatctcctggctcgcccgcgaagtg
accgcatctccagaagctctgttgagcgcattacgcctgagcgcgggttcgcctggtgcg
gcactctcgttattacaggctgaaagctgggcgcatcgcacagatttttgtgcggcactg
gcaaacacattaaacgcaggtgactggtatatcctgctcgcggcgttaaaccacgatcag
gccgccgcccgtttacactggctggcaacgttgttgacggatgccttgaagcgtccgtat
ggggtttcccatttaaccaatcctgatgcgctggacctgatatcttctatcgcagaacgg
ttatccgtcgcccggatacaggcgatactcggtgacgtttgtcattgccgtcagcagttg
ctgaacgtaacaggcgtaaaccgtgaactggtgttaaccgatcttatcctgcgtattgag
cattacctgcaaccaggcaccgtactgcctgttccccatctttga
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