Citrobacter sp. TSA-1: HF677_015040
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Entry
HF677_015040 CDS
T09275
Symbol
rlmI
Name
(GenBank) 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
cib
Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cib03009
]
HF677_015040 (rlmI)
Enzymes [BR:
cib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
HF677_015040 (rlmI)
Ribosome biogenesis [BR:
cib03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HF677_015040 (rlmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_31
MTS
TRM5-TYW2_MTfase
Methyltransf_25
Methyltransf_15
Methyltransf_11
PrmA
PUA
TRM
Spermine_synth
Methyltransf_12
Methyltransf_10
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
QKE20905
LinkDB
All DBs
Position
3109355..3110566
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AA seq
403 aa
AA seq
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MTESTIPHYPRLVLAKGREKSLLRRHPWVFSGAVARMEGKANLGETVDIVDHQGKWLARG
AFSPASQIRARVWTFDKSESIDIDFFTRRLQKAQTWRDWLAKKDGLDSYRLIAGESDGLP
GVTIDRFGNFLVLQLLSAGAEYQRAALINALQIVFPDCAIYDRSDVAVRKKEGMALTQGP
VTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENQRVLNCFSYTGG
FAVSALMGGCRQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRAYRDRGEK
FDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNPGGVLLTFSCSGLMTTDLFQKII
ADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRIM
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatctacaattccacattatcctcgtttagtgttagccaaggggcgcgaaaaa
tcattacttcgccgccatccatgggtattttccggtgctgtcgcacgtatggaaggtaaa
gccaacctcggtgaaaccgttgatattgttgaccaccaggggaaatggttagcgcgcggt
gcgttttctcctgcgtcgcagatccgtgcgcgcgtctggaccttcgataagtctgaatcc
atcgacattgatttctttacccgtcgtctgcagaaggcgcagacatggcgtgactggctg
gcgaaaaaggacggtctggacagctaccgtctgatcgccggagaatccgacggcctgcca
ggtgtcactattgaccgcttcggcaacttcctcgtattgcagttgctcagcgcgggtgct
gaataccaacgcgccgcgctgattaatgctctgcaaattgttttcccggactgcgctatt
tatgaccgtagcgatgtagccgtgcgtaaaaaagaaggtatggcgctgacccaagggccc
gtcacgggcgaattgccgcctgctctgctgcctatcgaagagcacggtatgaagctgctg
gttgatattcagcacggtcacaaaaccggctattacctcgatcaacgcgatagccgcctg
gcgacgcgtcgttatgtggaaaaccagcgtgtcctgaactgtttctcctataccggcggc
tttgcggtctcagcattaatgggcggatgccgtcaggtggtcagcgtcgacacctctcag
gaagcactcgatattgcccgccagaacgtggaactgaacaagctggatctgagtaaagcc
gagttcgtgcgagatgatgtgttcaaactgctgcgcgcctatcgcgatcgcggtgagaaa
tttgatgtcatcgtgatggatccgccgaaatttgtcgaaaataaaagccagttgatgggc
gcctgccgcggttataaggacatcaatatgctggctattcagttgctgaacccaggcggc
gtactgctgacattttcctgctccgggctgatgacgaccgatttatttcagaaaatcatc
gctgatgccgcaatagatgctggtcgtgatgtacaatttatagagcagttccgtcaggcc
gccgatcatccggtgatcgctacctacccggaagggctgtatctgaaagggtttgcctgt
cgcatcatgtaa
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