KEGG   Citrobacter sp. TSA-1: HF677_015065
Entry
HF677_015065      CDS       T09275                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
cib  Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:cib00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cib03400]
    HF677_015065 (helD)
Enzymes [BR:cib01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HF677_015065 (helD)
DNA repair and recombination proteins [BR:cib03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HF677_015065 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 DEAD
Other DBs
NCBI-ProteinID: QKE20910
LinkDB
Position
complement(3112841..3114895)
AA seq 684 aa
MELKATSLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFV
LPDDKVVRLHGTEWAETQRFHHHLNSLWQQWSQEMSDVAAGVLQQQLEAIATRTSENKWL
TREQTSGLQQQIRRAFAALPLPINRLEEFENCREALRQCQAWLKDIEACRLQHNQAYTDA
MLEEHADFFQQIESSPLNPAQARAVVNGEQSLLVLAGAGSGKTSVLVARAGWLLARGEAA
AEQILLLAFGRKAAQEMDDRIRERLHTEEITARTFHSLALHIISQGSKKVPTVSKLENDV
AARSKLFITTWRQQCSEKKAQAKGWRQWLEEEMQWSVPEGNFWDDEKLQRRLASRLDRWV
SLMRMHGGAQAEMIANAPEEIRDLFSKRIKLMSPLLKAWKGALKDENAVDFSGLIHQAIV
ILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSHTTLFAVGDDWQAIYRFSGAQL
SLTTAFQQNFGEGDRCNLDTTYRFNSRIGEVANQFIQQNPHQLTKPLNSLMAGDKKAVTL
LDESQLDLLLDKLSGFVKAEERILVLARYHHLKPASLEKAATRWPKLQLDFMTIHASKGQ
QADYVIVVGLHDGNDGFPAPARESIMEEALLPAVEDFPDAEERRLLYVALTRARHRVWLL
FNKETPSCFVDELKQLDVPVARKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaactgaaagcaacttctcttggaaaacgtctggcacaacacccttacgatcgggcc
gttattctcaatgccgggattaaggtttccggcgatcgtcacgagtatcttattcccttc
aatcagttactggctattcattgtaaacgcggcctggtatggggtgagctggagtttgtg
ctcccggatgataaggtggttcgtcttcacggcacagaatgggctgaaacccagcgcttc
catcaccatttgaattcgctctggcagcagtggagtcaggaaatgagcgacgtcgctgcg
ggagttttacagcagcagttggaggcgatcgccacccgcaccagtgagaataaatggctg
acgcgcgagcagacgtcagggctacagcagcagatccgccgcgcctttgccgcattgccg
ctcccgatcaaccggctggaagaatttgaaaattgccgtgaggcgttacgtcaatgccag
gcatggttgaaggacattgaagcttgtcgcttgcagcacaaccaggcgtataccgatgcc
atgctggaagaacatgccgattttttccagcaaattgagtcctcgccgctgaatccggcc
caggcgcgggcggtggtgaacggcgaacaatcattactggttcttgcgggggccggaagc
ggcaaaacatccgtattggtcgcccgtgcgggctggctacttgcgcgaggggaagcggcg
gcggaacaaatcctgctgctggcgtttggacgcaaagcggcccaggagatggacgatcgc
atccgtgaacgtctgcatacggaagagatcactgcgaggacgtttcattcactggcgttg
cacattatttcgcaggggagcaaaaaagtcccgacggttagcaagctggaaaatgatgtt
gccgcgcgtagcaaactttttatcacgacctggcgtcaacagtgcagtgagaaaaaggca
caggccaaaggctggcggcaatggttagaagaagagatgcagtggtctgtacccgaaggt
aacttctgggatgacgaaaaattacagcgccggctggcttcccggctggatcgttgggtt
agcctgatgcgtatgcatggcggagcgcaggcggagatgatcgccaatgctccggaggag
attcgcgatctgttcagtaaacgcattaagctgatgtctcccctgctcaaggcctggaag
ggcgccctgaaggatgagaatgccgtcgatttttccgggttgattcatcaggccattgtc
attctggaaaaaggccggtttatcagtccgtggaaacacattctggtcgacgaatttcag
gacatttctcctcagcgtgccgccctgttagccgcactgcgcaagcaaaactcacacact
acgctgttcgccgtaggggatgactggcaggcaatttaccggttcagcggagcacagctt
tcgttgaccaccgcattccagcaaaacttcggcgagggcgaccgttgtaatctggatacg
acttaccgttttaatagccgcattggtgaagtcgcaaaccagtttatccagcaaaaccct
catcagcttacgaaaccgctcaacagtctgatggcaggcgataaaaaagccgtcacgttg
ctcgatgaaagccagttggatctgctactggataagctgtcgggatttgtgaaggcagaa
gagagaattctggtgctggcgcgataccatcacctgaaaccagccagtctggagaaagca
gctacccgttggcctaagctacagctggatttcatgactatccatgccagtaagggacag
caggcagattacgttattgttgtggggcttcatgatgggaatgacggttttcccgccccg
gcccgcgagtcgattatggaagaggcgttgcttccggcggtggaggatttcccggatgct
gaagagagacgcttgctgtatgtggctctaacgcgtgcacggcatcgggtatggctgctg
tttaataaagaaacaccgtcgtgctttgtggatgagcttaaacaactggatgttccggta
gcaagaaaaccctga

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