Citrobacter sp. TSA-1: HF677_015595
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Entry
HF677_015595 CDS
T09275
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cib
Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cib03009
]
HF677_015595 (rimO)
Enzymes [BR:
cib01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HF677_015595 (rimO)
Ribosome biogenesis [BR:
cib03009
]
Prokaryotic type
ribosomal protein modification factors
HF677_015595 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
TRAM
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
QKE21013
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All DBs
Position
3232948..3234273
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AA seq
441 aa
AA seq
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MSNVTHQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV
QESLEAIGEALNENGKVIVTGCLGAKVDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP
KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGDVLSEAKR
LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVDLCEQLSKLGIWTRLHYVYP
YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTL
RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAGANDLPDQIPEEVKEERW
NRFMQLQQQISAERLQEKVGREILVIVDEVDEEGAIGRSMADAPEIDGAVYLNGETKVKP
GDIIRVKVENADEYDLWGTRV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtaacccaccagccgaaaatcggctttgtctccctcggctgcccgaaaaac
ctcgtcgattctgaacgcatcctgaccgaacttcgtaccgaaggctatgatgttgtgcca
agctacgacgacgcggatatggttatcgttaacacctgtggctttatcgacagcgcggtt
caggagtcgctggaagcaatcggcgaagcgctgaacgaaaacggcaaggtgatcgtcacc
ggctgtctgggcgcgaaagtcgatcagatccgtgaagtccacccgaaggtgctggaaatc
accgggccgcatagctacgaacaggttctggagcacgttcaccactatgtgcccaaacca
aagcacaacccgttcctgagcctggttcctgaacagggcgtcaagctcactccgcgtcat
tatgcctatctgaaaatttctgaaggctgcaaccaccgctgcacgttctgcattattccg
tcaatgcgtggcgatctggtgagccgtccgattggcgatgtcctcagcgaagccaaacgt
ctggtggatgcgggcgtgaaagagatactggttatttctcaggatacttccgcgtacggc
gtggatgtgaagcatcgcaccggtttccataacggcgagccggtcaaaaccagcatggtt
gatctgtgcgagcagttatcaaaactggggatctggactcgtctgcattacgtctatccc
tatccgcacgttgatgacgtgatcccactgatggcggaagggaaaatcctgccgtatctg
gacatcccgctgcagcatgccagcccgcgtattcttaagctgatgaaacgcccaggctcc
gtggacagacaactggcacgcatcaagcagtggcgtgaaatctgccctgaactgacgctg
cgctcaaccttcattgtcggtttcccaggtgaaacggaagaagacttccagatgctgctc
gacttcctgaaggaagcgcgtctggaccgcgtgggctgctttaaatacagcccggtagaa
ggcgctggcgccaatgacctgccggaccaaatcccggaagaggtgaaagaggaacgctgg
aaccgctttatgcaattgcaacagcaaatctccgctgaacgtttgcaggaaaaagtgggc
cgcgaaattctggttatcgttgatgaagttgacgaagaaggcgcgattggacgcagcatg
gctgacgccccggaaatcgacggcgcggtatacctgaatggcgaaaccaaggtgaaacct
ggcgatatcatccgcgtgaaggtcgaaaacgctgatgaatacgatctgtggggcacccgc
gtttaa
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