Citrobacter sp. TSA-1: HF677_016280
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Entry
HF677_016280 CDS
T09275
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib00020
Citrate cycle (TCA cycle)
cib00640
Propanoate metabolism
cib00660
C5-Branched dibasic acid metabolism
cib00720
Other carbon fixation pathways
cib01100
Metabolic pathways
cib01110
Biosynthesis of secondary metabolites
cib01120
Microbial metabolism in diverse environments
cib01200
Carbon metabolism
Module
cib_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cib_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HF677_016280 (sucD)
00640 Propanoate metabolism
HF677_016280 (sucD)
00660 C5-Branched dibasic acid metabolism
HF677_016280 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
HF677_016280 (sucD)
Enzymes [BR:
cib01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
HF677_016280 (sucD)
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Gene cluster
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QKE21139
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Position
complement(3376202..3377071)
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AA seq
289 aa
AA seq
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MSVLINKDTKVICQGFTGSQGTFHSEQAIAYGTQMVGGVTPGKGGTTHLGLPVFNTVREA
VEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMI
GPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGG
DPIPGSNFINILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHVTKPVVGYIAGVTAP
KGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVIK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttttaattaataaagataccaaggttatctgccagggcttcaccggtagccag
gggacattccactctgaacaagcgattgcttacggtacgcaaatggtcggcggtgttacg
ccgggcaaaggcggcaccacgcatctgggtctgccggtgttcaacaccgtacgtgaagcg
gtagaagcgaccggcgcaaccgccaccgttatctacgttccggctccgttctgcaaagac
tccatcctggaagctattgatgcaggcatcaagcttatcatcaccatcaccgaaggtatc
ccaacgctggatatgctgactgtgaaagtgaagctggatgaagctggcgtgcgcatgatt
ggcccgaactgcccaggtgttatcacccctggtgaatgtaaaatcggcatcatgccgggc
catattcacaagcctggtaaagtcggtatcgtttctcgttccggtacgctgacctatgaa
gcggttaagcagaccaccgactatggttttggtcagtctacctgtgtgggtatcggcggc
gacccgatccctggctctaacttcatcaatatcctgaagctgttccaggaagatccgcag
actgaagcgatcgtcatgatcggtgagatcggcggtagcgcggaagaagaagcagcggcg
tacattaaagatcatgtgaccaagccggttgtgggttacatcgcgggtgtgacggcgccg
aaaggtaaacgtatgggtcatgctggtgcgatcatcgcaggtggtaaaggtacggcggat
gagaaattcgctgcgctggaagccgctggcgtgaaaaccgttcgtagcctggccgatatc
ggcgaagcgctgaaaacagtgattaagtaa
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