Citrobacter sp. TSA-1: HF677_016380
Help
Entry
HF677_016380 CDS
T09275
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cib
Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cib03400
]
HF677_016380 (phrB)
Enzymes [BR:
cib01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HF677_016380 (phrB)
DNA repair and recombination proteins [BR:
cib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HF677_016380 (phrB)
Prokaryotic type
HF677_016380 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QKE21158
LinkDB
All DBs
Position
complement(3397561..3398979)
Genome browser
AA seq
472 aa
AA seq
DB search
MTTHLVWFRRDLRLHDNLALAAACRDRTAQVIALYISTPEQWKAHEMAPRQAAFVSAQLN
ALQTALAEKGIPLLFDEVADFATSVETVKNVCAQHSVSRLFYNYQYEINERQRDVAVEKV
LPHVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRIKEGVPECVSAPKVRESGA
LDALLTSITLSYPQQDFDTQRFVAEEKLAIAQLRQFCQQAAREYEQQRDFPAVDGTSRLS
ASLATGGLSPRQCLNRLLAEQPQALEGGEGSVWLNELIWREFYRHLMTYHPALCRHQPFI
RWTDRVQWQNNPAHLHAWQTGNTGYPIVDAAMRQLNATGWMHNRLRMITASFLVKDLLID
WRKGEQYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDRDGEFIRQW
LPELRDVPGKAIHDPWTWAEKAQVTLNYPRPIVDHKQARLATLAAYEAARKE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccatctggtctggtttcgacgtgatttacgtctgcatgacaacctcgcgctg
gcggcggcttgtcgggatcgtactgcgcaggtcatcgcgctatatatctctactcctgag
cagtggaaggcgcacgaaatggccccacgtcaggcggcatttgtgagtgcgcagttgaat
gcgttgcagacggcgctggcggaaaaaggcatcccgcttctgtttgatgaagttgcagat
tttgcgaccagcgtggaaaccgtcaaaaacgtctgcgcacagcatagcgtcagccgattg
ttttataactatcaatacgaaataaacgaacgtcagcgtgatgtcgccgttgagaaggta
ctaccccatgtggtgtgtgaagggtttgacgacagcgtgatcctgcctccaggggcggtc
atgaccggcaatcacgagatgtataaagtctttacaccgtttaaaaatgcctggctgaag
cggattaaagagggtgttccagaatgcgttagtgcgccgaaggtgagagaaagcggcgct
cttgacgctctgttaacatcaataacgctgagctatccgcagcaagattttgatacgcag
cggtttgtggcagaagaaaaactggctatcgcgcaattacgccagttttgccagcaggcc
gcgagagaatatgagcaacagcgtgatttccctgcggttgacggtaccagtcgattatcc
gcgagcctggcgacagggggattgtcgccgcgccagtgcctgaatcgactgctcgcggag
cagccgcaggcgcttgaaggaggggaaggcagcgtctggctgaacgaacttatctggcgt
gaattttatcgtcatctgatgacttaccatccggcgctgtgtcggcatcaaccgtttatc
cgttggaccgatcgcgtgcaatggcagaataatccggcacatttgcatgcctggcaaaca
gggaacacgggatacccgattgtggatgcggcgatgcgtcagctcaacgccacgggctgg
atgcataatcgattacgcatgattacggccagttttttagtgaaagatctgctgatcgac
tggcgtaaaggcgagcaatattttatgtcgcaactgatcgatggcgatctggcggccaat
aacggcggctggcagtgggcggcctcaaccgggaccgacgccgcaccgtatttccgtatc
tttaaccccacgactcagggcgaaaaatttgaccgcgacggtgagtttatccgccagtgg
ctgccggaactgcgcgatgtgccgggtaaagccattcatgacccgtggacatgggctgaa
aaagcgcaggttacgcttaactatcctcgtccgattgtcgatcataaacaggcaagactg
gcgacgctggcggcctatgaggcggcgcgtaaagagtag
DBGET
integrated database retrieval system
