Citrobacter sp. TSA-1: HF677_016655
Help
Entry
HF677_016655 CDS
T09275
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib03030
DNA replication
cib03430
Mismatch repair
cib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HF677_016655 (holA)
03430 Mismatch repair
HF677_016655 (holA)
03440 Homologous recombination
HF677_016655 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cib03032
]
HF677_016655 (holA)
03400 DNA repair and recombination proteins [BR:
cib03400
]
HF677_016655 (holA)
Enzymes [BR:
cib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HF677_016655 (holA)
DNA replication proteins [BR:
cib03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HF677_016655 (holA)
DNA repair and recombination proteins [BR:
cib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HF677_016655 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QKE21205
LinkDB
All DBs
Position
3455652..3456683
Genome browser
AA seq
343 aa
AA seq
DB search
MLKLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAIRQAAATQGFEEHHAFTLDNSTD
WGEIFSLCQAMSLFASRQTLLLQLPENGPNAAINEQLASLVTLLHDDLLLMVRGNKLTRA
QENAAWYTGLANNAVQVSCQTPEQAQLPRWVAARAKLNNLQLDDAANQLLCYCYEGNLLA
LAQALERLALLWPDGKLTLPRVEKAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEG
SEPVILLRTIQRELLLLVNLKRQSAHTPLRTLFDKHRVWQNRRGMMGDALNRLNPAQLRQ
AVTLLTRTEITLKQDYGQSVWAELEGLSLLLCHKSLADVFIDG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagttgtaccctgaacaactccgcgcacagctcaatgaagggctgcgcgcggcg
tatctactcttaggtaacgatcctctcttattgcaggaaagccaggatgccatccgtcag
gctgccgcaacacaaggattcgaagaacaccacgccttcactctggacaacagcaccgac
tggggagagatattttcactctgccaggcgatgagcctgtttgccagccgtcaaaccctg
cttctgcagttgcctgaaaatggccctaatgccgccattaatgaacagctcgcgtcactc
gtcactctgttacatgacgatctgctactgatggttcgcggcaacaaactcaccagggca
caggaaaacgccgcatggtatacggggcttgcaaataacgcggttcaggtaagctgccag
acgccggaacaagcacagcttcctcgctgggttgccgccagggcgaaacttaacaacctg
cagctggatgacgcagccaatcagcttttgtgctattgctatgaaggtaatttgttagca
ctggcgcaagcgctggaacgattagcgttgctttggcctgacggcaagctaacgctgcct
cgcgtggagaaagcggttaacgatgccgcgcactttaccccattccactgggtagacgcg
ctgctgatgggcaaaagcaaacgcgcgctgcacattctgcagcagctacgcctggaaggt
agcgagccggttattttgctgcgtacgatacagcgtgagttgctgttgctggttaactta
aaacggcagtcggcccatacgcctttgcgcacgttgtttgataaacaccgggtgtggcaa
aatcgccggggtatgatgggagatgcgttaaaccggctgaacccggcgcaactgcgtcag
gctgttacgcttttaacgcgtacggaaattacgcttaaacaagactatggtcagtcagtg
tgggcggaacttgaggggctttcccttttgctctgtcataaatcgctggccgatgttttt
attgatggttga
DBGET
integrated database retrieval system
