Citrobacter sp. TSA-1: HF677_017130
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Entry
HF677_017130 CDS
T09275
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K21746
AraC family transcriptional regulator, reactive chlorine species (RCS)-specific activator of rcl operon
Organism
cib
Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cib03000
]
HF677_017130
Transcription factors [BR:
cib03000
]
Prokaryotic type
Helix-turn-helix
AraC family
HF677_017130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_18
Cupin_6
HTH_AraC
AraC_binding
Cupin_2
DUF6928
TetR_N
Motif
Other DBs
NCBI-ProteinID:
QKE21297
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Position
3563235..3564089
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AA seq
284 aa
AA seq
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MDALSRLLMLNDPQGSIDQNCLLSRDWQLPHAAGELSVIRWHTVTQGFAQLDMPDGTSST
LRPGTIVILPQNSAHRLCQTGEEQTHIVCGSLRLQASSRYFLTALPEVLILAPEDNSPIS
HWLKAMIALMQQEYINDLPGSNIVCSQQCATLFALAVREWLAQPTPAKNVLNLLLHPRLG
AVVFMMLESPAFPWTVEELAKRAHMSRASFAQLFREVSNSTPLAVLTELRLQFAAQMLSR
GSQPLIVIAESVGYASESSFHKVFLRGFGCTPGEYRKRVKALAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgcacttagccgattacttatgcttaacgacccgcagggctcgattgatcaaaac
tgcctgctgagcagggactggcaactgccgcatgcggcgggtgagctgtccgttatccgc
tggcatacggtaacccaggggtttgctcaactggatatgccagacggaacgtcttctacg
ttacgcccaggaacaatagtcattctgcctcaaaactccgcgcatcggctgtgccagaca
ggggaagaacaaacgcatattgtctgcggaagcctgcgattgcaggcatcttcacgctat
tttttaaccgcccttccggaagtattaatactggcaccagaagataacagtcccattagc
cactggctgaaggccatgattgcgctgatgcagcaggaatacatcaacgatctgcctggc
tccaacatcgtttgcagccagcaatgcgctacgctgttcgcgttagccgttcgcgagtgg
ctagcccagccgacacccgctaaaaatgtgctgaatttactgctgcacccaaggctgggt
gccgttgtcttcatgatgctggagtcaccggcttttccctggactgtcgaagaactggca
aagcgtgcccatatgtcgcgggccagctttgcgcagctattccgtgaagtatcaaactcc
acgccgctggcggtgttaaccgagctacgcctgcaattcgccgcccagatgctgtcacgc
ggatcgcaaccgttgatcgttattgccgagtcggtgggttacgccagcgaatcgtcgttt
cacaaagtctttttacggggatttggctgcacgccgggcgagtaccgaaaacgcgtgaaa
gcgctggcggcataa
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