Citrobacter sp. TSA-1: HF677_017510
Help
Entry
HF677_017510 CDS
T09275
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib03030
DNA replication
cib03430
Mismatch repair
cib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HF677_017510 (dnaX)
03430 Mismatch repair
HF677_017510 (dnaX)
03440 Homologous recombination
HF677_017510 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cib03032
]
HF677_017510 (dnaX)
03400 DNA repair and recombination proteins [BR:
cib03400
]
HF677_017510 (dnaX)
Enzymes [BR:
cib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HF677_017510 (dnaX)
DNA replication proteins [BR:
cib03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HF677_017510 (dnaX)
DNA repair and recombination proteins [BR:
cib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HF677_017510 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_4
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_18
AAA_16
ResIII
AAA_2
AAA_14
AAA_assoc_2
AAA_7
PIF1
TsaE
nSTAND3
RCF1-5-like_lid
Motif
Other DBs
NCBI-ProteinID:
QKE21368
LinkDB
All DBs
Position
complement(3647077..3649005)
Genome browser
AA seq
642 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
EQIRHQLEHILKEEHIAHEPRALQLLARAADGSLRDALSLTDQAIASGDGQVSTDAVSTM
LGTLDDDQALSLVEAVVAADGERVMTLVNDAAARGIEWEALLVEMSALLHRIAMVQLSPA
ALGSDMAAIEQRMRELARIVPPTDVQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH
PRMPLPEPEAPRQSFAPVAPTAVMNTTQVPQQPAAAQQQQNVPLSDATSQVLAARSQLQR
AQGATKPKKSEPAAASRARPVNNAALERLASVSERVQARPTVSALEKAPAKKEAYRWKAT
NPVAEVKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVAL
NAWKEENGNVVCLHLRSTQRHLNSSGAQQKLAEALSSLTGSTVELTIVEDDNPAVRTPLE
WRQAIYEEKLAQARESIIADNNIQTLRRFFDADLDEESIRPI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtcttagcccgaaaatggcgcccacaaacctttgctgacgtcgtcggc
caggaacatgtgctgacggcactggcgaacggcttgtcgttagggcgtattcatcatgct
tatttgttttccggcacccgtggcgtcgggaaaacgtcaatcgcccgtttgctggcgaag
ggattaaactgtgaaaccggcatcaccgctacgccgtgcggcgtgtgtgataactgccgt
gaaatcgagcaggggcgctttgtcgatttgattgaaatcgacgccgcctcacgcaccaaa
gtcgaagacacccgtgacctgctggataacgtccagtacgcgccagcgcgcggtcgcttt
aaggtctatttgattgacgaagtgcacatgctgtcgcgccacagttttaacgccttgctg
aaaacgctcgaagagccgcccgcacacgttaagttcctgctggcgaccaccgatccgcag
aagctaccggtgactatcctgtcgcgctgtctgcaattccatcttaaagcgttggatgtc
gaacagattcgccatcagcttgagcatatcctcaaagaagagcatatcgcccatgagcca
cgtgcgttgcaactgctggctcgcgccgcggacggcagcctgcgcgatgcgctgagcctg
accgatcaagcgatcgccagcggcgatggtcaggtctcgaccgacgcggtcagcaccatg
ctcggcacgctggacgacgaccaggcgctttcgctggttgaagcggttgtggctgcggac
ggcgaacgcgttatgacgctggtgaacgatgccgccgcgcgcggtattgaatgggaagcg
ctactggttgagatgtcggctctgctgcatcgtattgccatggttcagctttcacctgcc
gcgctcggcagcgatatggccgctattgaacagcgtatgcgcgaactggcgcgaatcgtc
ccgccaaccgatgtgcagctttactaccagaccctgttaatcgggcgcaaagaactgccg
tatgcgccggacaggcgaatgggcgttgaaatgacgctgctacgtgcgctggcttttcat
ccgcgcatgccgctcccggaacctgaagccccgcgacagtcttttgccccggtcgcaccc
actgcggtgatgaacacgacgcaggtgccgcagcagcctgcggcagcgcaacagcaacag
aatgtgccgctctccgatgctaccagccaggtgctggcggcacgcagccagctgcaacgc
gctcagggagcaaccaaaccaaaaaagagtgaaccggcagccgcttcccgcgcgcggccg
gtgaataatgctgcgctggaaagactggcttcggtgtcggaacgtgttcaggcgcgccca
actgtctctgcgctggaaaaagcgccagcgaagaaagaagcgtatcgctggaaagcgacc
aatcctgttgcagaagtcaaagaagtcgtcgctacgccgaaagcgctgaaaaaagcgctt
gagcatgaaaaaacgccagaactggcggcaaagctggcggctgaggccatcgaacgcgac
ccgtgggccgcacaggtaagccagctctcgctgcctaaactggtggagcaggtggcgctt
aatgcctggaaagaagagaatggcaacgtggtttgcctgcacctgcgttccacgcagcga
caccttaactccagcggcgcgcagcaaaaactggccgaagcattgagttccttaacaggg
tcaacggttgaattgaccatcgttgaagatgataatccagcggtgcgcacgccgctggag
tggcgtcaggccatttatgaagagaaactcgcgcaggcgcgtgagtcgattattgcggat
aataacattcagacgctgcgtcgttttttcgatgcggacctggacgaagagagtattcgc
cccatttga
DBGET
integrated database retrieval system
