Citrobacter sp. TSA-1: HF677_017980
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Entry
HF677_017980 CDS
T09275
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cib
Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cib03400
]
HF677_017980 (sbcD)
DNA repair and recombination proteins [BR:
cib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HF677_017980 (sbcD)
Archaeal homologous recombinant proteins
HF677_017980 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QKE21460
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Position
3744741..3745943
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AA seq
400 aa
AA seq
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MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLETAQSQQVDAIIVAGDIFDTGSPPSYAR
ELYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDILAFLNTTVVASAGHGPQILPLRDG
TPGAILCPVPFLRPRDIITSQAGLTGQEKQQHLLGAITDYYQQQYQDACTLRGDHNLPII
ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGTEHIRYCGS
PIALSFDECGKSKCVHLVSFDAGKLSAVENLTVPVTQQLAVLKGDLAAITTQLEQWRGVQ
QEPPVWLDIEITTDDYLHDMQRKIQALTEDLPVEVLLVRRSREQRERIMANERRETLSEL
SVAEVFDRRLALEELEEPQRERLNQLFSATLQTLAGEAEA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatccttcacacgtctgactggcatctgggccaaaatttctacagcaagagccgc
gccgccgagcatcaggcctttctcgactggctgctggaaacggcacaatcccagcaggtg
gatgccattattgtggcaggcgatattttcgataccggctcaccgcctagctatgcccgt
gagctgtataaccgttttgtcgtcaatctgcagcaaaccggctgtcatctggtggtgctg
gcaggcaaccacgactccgtcgccacactcaatgaatcccgagatattctggcgtttctc
aacaccacggtggttgccagcgctggtcatgggccgcagatactgccgctacgcgacggt
acgccgggggcgatcctgtgtccggtgccttttttacgtccgcgcgacatcatcaccagc
caggccgggctgacaggacaagaaaaacaacagcatttactgggcgcaatcaccgactac
tatcagcagcagtatcaggatgcctgcacgctgcgcggcgaccacaatctccccatcatt
gcgaccgggcatttgaccaccgttggagccagtaaaagcgacgccgtacgtgacatttat
atcggtacgctggacgctttcccggcgcaaaacttcccaccggcagactacatcgcgctg
ggacatattcaccgggcgcagattatcggcggcacggaacatattcgctactgcggctcg
ccgattgccctcagttttgacgagtgcggcaaaagcaaatgtgtacatctggtgagcttt
gacgcggggaaactcagcgccgttgaaaatctcaccgtgccggttacgcagcagcttgcg
gtactgaaaggcgatttagccgccattactacccagcttgagcagtggcgcggcgtgcag
caagagccaccggtgtggctggatattgaaatcaccaccgacgactacctgcatgatatg
caacgtaagatccaggccttaaccgaagatttaccggtagaggtgctactggtgcgccgc
agtcgggaacagcgcgaacgcattatggccaatgaacgacgtgaaacgttaagcgagctg
agcgtggcagaggtttttgaccgccgcctggcgctggaagaactcgaagaaccgcagcgt
gagcggcttaaccagctgtttagcgcaaccttacaaacgcttgccggggaggctgaagca
tga
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