Citrobacter sp. TSA-1: HF677_018275
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Entry
HF677_018275 CDS
T09275
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
cib
Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cib03000
]
HF677_018275 (prpR)
Transcription factors [BR:
cib03000
]
Prokaryotic type
Helix-turn-helix
Other families
HF677_018275 (prpR)
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GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_5
HTH_psq
AAA
AAA_2
AAA_7
FGase
ResIII
HTH_23
RWP-RK
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QKE21516
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Position
3811258..3812868
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AA seq
536 aa
AA seq
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MADTHLPPRVNDDKPVIWTVSVTRLFELFRDISLEFDHLATITPIQLGFEKAVTYIRKKL
ATERCDAIIAAGSNGAYLKSRLSIPVILIKPSGFDVLQALAKAGKLTSSIGVITYQETLP
ALLAFQKTFNLQLEQRSYITEEDARGQINELKASGTQAVVGAGLITDLAEEAGMTGIFIY
SAATVRQAFVDALDMTRLTLRRNGPYVSGDTLRTRYALGDMRGHSAQMEQVRHTIMLYAR
SRAPVLIQGETGTGKELAAQAIHREFFTRQENRRGKPSPPFVAVNCGAITESLLEAELFG
YEDGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKEVTRVGGHQPI
PVDVRVISATHCHLEQEIKQGEFRTDLFYRLSILRLTLPPLRERLPDILPLAEGFLKQSL
AELEVPFSEPVRKGLGLSQPTLLNYGWPGNIRELRNMMERLALFLSVEPQPELNVQFLQQ
LLPELAVAADAPQVSSSLTPQQVLAQFNGDKTAAARYLGVSRTTFWRRLKENPPIQ
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggctgatacgcatcttccgccgcgggtgaacgacgacaaaccggttatctggaccgtt
tcggtcacgcgcctgttcgaactgtttcgcgacatcagcctggagttcgaccacctggca
accatcacccctattcagcttggttttgaaaaagcggtgacgtatatccgcaagaagtta
gccaccgagcgttgtgatgccatcattgccgcgggttccaacggggcgtatctgaaaagc
cgtttatcgattccggtgatcctgattaaacccagcgggtttgacgtgctacaggcgctg
gccaaagcgggaaagctcacctcgtcgattggcgtcattacctatcaggaaaccctcccc
gcgctgctcgcttttcaaaaaaccttcaatttgcagcttgaacaacgcagctatatcacg
gaagaagatgcccgtgggcaaatcaacgaactgaaagccagcggcacgcaggcggtcgtc
ggcgcggggttgattaccgacctggctgaagaagcaggcatgaccggcatctttatctat
tcggcggccaccgtgcgccaggcctttgtcgatgcgctcgatatgactcgtctgacgctg
cgcagaaacggtccgtacgtttccggcgatacgctgcgcacccgctatgcgctgggggat
atgcgcggtcactcggcacagatggaacaggtgcggcacaccattatgctttatgcccgt
tcgcgtgcaccggtgctgattcagggcgaaacaggcacgggcaaagagctggcggcgcag
gcaattcatcgtgagtttttcacccgtcaggagaaccggcgcggtaaaccttcgccgccg
tttgttgccgtcaactgcggggcaatcaccgaatcattactggaagcggaactgttcggc
tatgaggatggcgcctttaccggctcccgtcggggaggacgcgcgggcctgtttgaaatc
gcccacggcggaacgctgtttcttgatgagataggcgaaatgccgctgccgttacaaacc
cgactgttgcgcgtactggaagaaaaagaggtcacccgggtcggtggacatcagccgatt
ccggtcgatgtacgggtgattagcgccacccactgtcatctggagcaggagataaaacag
ggagaatttcgcaccgatctgttttatcgcctgagtattttgcgcctcacgctaccgccg
ctacgcgagcgattgcccgatatcctgccgctggcggaaggctttttaaaacagtcgctg
gcggaactggaggtgccgttttctgaacctgtgcgcaaggggctgggtctgagtcaaccg
acgttactgaattatggctggcctgggaatatccgtgaactgcgtaatatgatggagcgc
ctggcgctgtttttaagcgtcgagccgcagccggagctgaacgtacaattcctgcagcag
ctgttaccggaactggccgttgctgctgacgcgccgcaggtatcctcatcgctcacgccg
cagcaggtgctggcgcaattcaatggcgataaaaccgcggctgcacgatatctcggggta
agccgaaccaccttctggcgcagattaaaagaaaacccgccgatacaatga
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