Citrobacter sp. TSA-1: HF677_020030
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Entry
HF677_020030 CDS
T09275
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cib
Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cib03400
]
HF677_020030 (radA)
DNA repair and recombination proteins [BR:
cib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HF677_020030 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
DUF7125
RecA_N
Rad51
GvpD_P-loop
AAA_22
AAA_16
SLFN-g3_helicase
nSTAND_NTPase5
ABC_tran
AAA_14
nSTAND3
NTPase_1
AAA_24
AAA
cobW
Zn_ribbon_Thio2
Zeta_toxin
DZR
AAA_29
AAA_5
Viral_helicase1
Herpes_Helicase
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
QKE21853
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Position
complement(4197223..4198605)
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AA seq
460 aa
AA seq
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MAKAPKRAFVCNECGADYPRWQGQCSACQAWNTITEVRLAASPTVARNERLSGYAGNAGI
AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA
EQMKTLYVTGEESLQQVAMRAHRLGLPTANLNMLSETSIEQICLIAEEEQPRLMVIDSIQ
VMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV
MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA
KHGFRRAIVPAANVPKKVPEGMQVFGVKKLTDALSVFDDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggccaaagctccaaaacgcgcctttgtttgtaacgaatgcggggccgattacccgcgc
tggcaagggcaatgcagcgcctgtcaggcctggaacaccattaccgaggtacgccttgcc
gcgtcaccaacggtggcgcgtaacgagcggctcagcggctatgccgggaatgcgggcatc
gcaaaagtgcagaagctgtctgatatcagccttgaagagttgccgcgtttttccaccgga
tttaaagagtttgatcgcgtgctgggcggcggtgtggtgcccggcagcgccatcctgatt
ggcggtaaccccggcgcagggaaatcaacgctgctgctgcaaacgctgtgcaagctcgct
gagcagatgaaaaccctgtacgtcaccggcgaagagtctttgcaacaggtggcgatgcgc
gcgcatcgactcggtctgccgacggcgaatctgaacatgctgtcggaaaccagcatcgaa
caaatttgcctgattgccgaagaagaacagccgaggctgatggttatcgactccattcag
gtgatgcacatggcggatattcagtcttcgccgggcagcgtggcacaggtacgcgaaacc
gcggcttacctgacccgctttgccaaaacgcgcggcgtggcgattgtcatggtcggccac
gtcaccaaagacggctcgctggccggtccaaaggtgctggagcactgtattgactgctcg
gtgctgctcgacggcgacgccgattctcgttttcgtactctgcgtagccataaaaaccgc
tttggcgcggtgaatgaactgggcgtctttgccatgaccgaacaggggctgcgtgaagtt
agcaacccttccgctatcttcttaagccgtggcgatgaagtcacctccggcagttcggtg
atggtggtctgggaaggcacgcgcccgttgctggtggagattcaggcgctggtcgaccat
tcgatgatggcgaatccgcgtcgtgtggcggtcggtctggagcagaaccgtctggcgatt
ctgctggccgtgctgcatcgtcacggcggcttgcagatggcggatcaggacgtgttcgtc
aacgtggtcggcggcgtgaaggttaccgaaaccagcgccgatctggcactgctactggca
atggtttccagcctgcgcgaccgaccgctgccgcaggacttagtggtctttggcgaagtg
ggactggcgggcgaaatccgtccggtacccagcggccaggagcgtatttccgaagcggcg
aagcacggctttcgtcgggcgattgttcctgccgccaacgtgccgaaaaaagtgccggaa
gggatgcaggtctttggcgttaagaagcttacggatgctttaagcgtgtttgacgaccta
taa
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