Citrobacter sp. TSA-1: HF677_020500
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Entry
HF677_020500 CDS
T09275
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
cib
Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
HF677_020500
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
ResIII
Motif
Other DBs
NCBI-ProteinID:
QKE21939
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Position
4295356..4301676
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AA seq
2106 aa
AA seq
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MTTRYFSSLIEQSLSRSTEATLSIMGVTNPQLREHLAQQMGADCGKSGSFLASPVFQQMF
GWKASNKTMRSLTEGKALLSKAVVDSLDDQNNGRYRFGADWKPFTHQLASWKALLEKKHS
VVVTSGTGSGKTECFMVPVLEDLYRELHENGNNPLIGVRALFLYPLNALINSQRERLDAW
TRGFGSGIRYCLYNGNTENLHAAVKSEQVKRPNEVLSREKMREEPAPILVTNGTMLEYMM
VRQIDAPIIQQSKSQKSLRWIVLDEAHTYVGSQAAELALQLRRVMTAFGVTPDDVRFVAT
SATIAGSDAEKQLKKFLSELSGIPQERIDVLDGSRVIPELEPCKHVFIPLEEIEQIPDTD
MKGVSPERFDALTHSPEAYYLRDMLVTQPNPMKLDDMTQRLNSLTKQHYSQQDVLRWIDV
CSGTQPNTKDPAFLKVRAHIFQRNTQGVWACVDKECRLKHGTPLEKGWPFGYVYVNKRQN
CDCGSPVYELAFCNECNEPHLLARDKKGKLVQWENKGGDEFSLQDDVHIENDAAEEKVDK
ESRFQPPLIIAAEKTSEAGYTLQRLDRQTRRIGVINNDSIPLVINDIEQVCSASSCGYRG
ASGKQPFRRALLGGPFYVTNIVPTVLEYCQDFISEEGKEGVGPDSLPGRGRRLITFTDSR
QGTARMAVRMQQEAERSRLRGSVVEILSWHQRTQTSATPNANADLEKLATRAKQARHEAK
EYRSWGMPEQAKLAEAQAEQLEQAIQAATGGKAATILVSRTWIEMVNELKEKADIRGPIL
QYNHYLKPEIFNENGGPLKLSEMLLFREFMRRPKRTNSLETQGLVQVGYQGLEKIHKMPV
HWQEKGLTLDDWKDFLKVTLDLYVRESNFTQLDDELKNWIGSRFSSKFVRNPDTKDPEDN
QNRRWPQIRNGNISHRLVKLLMLGAGFKTVNTATMDIINTWLKEAWTQLTGPLAVLKPDG
NRFYLPKEHMTFSLITDAWICPVTNKILDTAFKGLTPYLPTHISFEHLTKTQYDAFVAQK
VTMPEIWKLDRSQEDYAPGLAKVRDWVSKEPLIAQLRSENVWTDINDRVVEGGFYYRTAE
HSAQQSSERLQSYEKMFKNGQLNVLNCSTTMEMGVDIGGITAVVMNNVPPHPANYLQRAG
RAGRSQESRAISYTLCKGNPHDQQVFANPLWPFETMIPAPMVAMNSARLVQRHVNALLLS
DFLCHVIGETDKEKTSLDSLWFFGEDDGQSKCERFKVWLERPVLDIDAALERLVKGTALH
GARPDLLRDKTIHAITFMQQRWLSVYRDLVAQERESQPQTPYRKRIELEKKRHCGEYLLR
DLAARTFLPGYGFPTDVVTFDNFTMEDYIREKSQKNRDKKDREDNVSRYKGLPSRNLGVA
IREYAPGAEIILDGRVFRSAGVSLHWHNINADTNEAQRLDCAWRCHKCGTIGYEEGLSSS
GTLFCTNSACGEKIIMDNRRQVLQPAGFVTDAHAPVTNNIETMKFIPVVPAWVFVKAEPA
SLPNPIMGYMASGADGHVFQQSLGEGGHGYALCLSCGRAESMLNANDAPKSMEAHYPPRP
GKADRDSQNQRLICPGSTALMKNVTLGALARTDVFEMVLRKPQNGEYLPDSTEEGRIVAM
TLAVALRQALAGVLGISAAELGYAVRPVRLEDGQSVLAVQLYDVISGGAGFASSAPMHIE
AILLGMVKQLGCHHCDTACSECLLDSQTRHDHDLLDRKAAQAWLGDDFSYYIGLPDDETF
SLPDARYCPGAIGDTLRRAINEGAEKLTLWMNGPLNEWDLYARQFRAAIQNYRIKDNVAV
DLVIPAGVDDPELLHELSQFTALGVRLCHSEQALELPIVAQVAFADRVMTLASRSQQATI
PGPGWHLNDELVVRSLGYNTVKLNEFVLPGKAANAVERVKDIEIHKQLNGPLSQFGQRFW
DLLCNNHEEAQSLMKNQRITSVHYTDRYLQNPVALALLGAILKPLKTKLTDDAELELDTL
FKPKDRSGNRPSHDWMSEADFQDFADQWFTAAMGRAVELTVFDSPRDIPHHRKLTVTFED
SQMLKIRFDQGMGYWRIDFPYAWRNFDFTDDVTYQLVKLAQACQEGKVLNSEESWATDVL
VEVMPS
NT seq
6321 nt
NT seq
+upstream
nt +downstream
nt
atgactacacgctatttttcgtcacttattgaacaatcgttgtctcgttcaactgaagca
acactgagtatcatgggggtcacaaacccgcagttgcgtgagcacctcgcgcaacaaatg
ggcgccgattgtgggaaatcaggctcattccttgcttctcccgttttccaacaaatgttt
ggctggaaagcgtcaaacaaaacgatgcgtagcctgacggaaggcaaggcattgctcagt
aaagctgtggttgattcgctggatgatcagaacaatggacgctatcgttttggtgctgac
tggaaaccctttactcaccagctagccagttggaaggctctgctggaaaaaaaacattct
gtggtagtgaccagcggtacgggttcaggcaaaaccgaatgttttatggtgccggtgctg
gaagacctctaccgggaattacatgaaaatggcaacaacccacttatcggcgtcagggcc
cttttcctctatccacttaacgccttaattaattcgcaacgtgagcgcctggacgcttgg
acacgtggttttggttccggaatccgatactgcctctacaacggaaataccgaaaatcta
cacgccgcagtgaaaagcgaacaggtaaaaagaccgaatgaagtactctcgcgcgaaaaa
atgcgtgaagaacccgctccaattctagtgaccaacggcacaatgctggaatatatgatg
gtccgccagatcgacgctccaattatccagcaatctaaatcacaaaaatcattacgctgg
atcgtattggatgaagcgcatacctatgtcggctcgcaggccgctgaactggcgctgcag
ttacgccgcgtgatgacggcctttggtgtgactccagatgatgttcgctttgtagcaacc
tctgcaaccattgccggaagcgatgccgaaaagcaattaaaaaaattcctctctgaatta
tccggtataccgcaagagcgcattgacgtactggacggaagccgggttattccggaactg
gaaccatgcaaacacgtttttattccgttagaagaaattgagcaaatccctgatacagac
atgaagggcgtaagcccagagcgctttgatgcacttacgcattcacctgaagcgtattac
ttgcgcgacatgctagttactcaaccgaatccaatgaagttggatgatatgacgcagcgg
ttgaactcgctaacaaaacagcattatagccagcaggatgtgttgcgctggattgacgtc
tgctctggcacacaacccaatactaaggatcccgcatttcttaaggtcagggcgcacata
ttccaacgcaatacccagggggtgtgggcctgtgttgataaagaatgcagattaaagcac
ggtaccccgctggaaaagggttggccttttggctatgtgtatgtgaacaaacgccaaaat
tgcgattgtggaagcccggtttacgagctggcattctgtaatgaatgtaatgagccacat
cttctggcgcgggacaaaaagggaaaacttgtccaatgggaaaataaaggcggtgatgag
ttctctttgcaagatgatgtgcatattgaaaatgatgccgcagaagaaaaagttgataaa
gagagtcgttttcagcccccactcattatcgccgcagagaagaccagcgaggcgggttat
accctacagcgtctggaccgtcagacacgtcgtattggtgttattaacaatgacagcatc
ccgctggttattaacgacattgaacaagtatgtagtgccagtagctgtggctacagaggc
gcgagcggaaaacaaccgttccgccgagccttattaggtgggccattttacgtcaccaat
attgtgccaaccgttctggaatattgtcaggattttattagtgaagaaggaaaagagggc
gtcggacctgattcgttaccaggtcgaggccgtcgacttattacctttaccgacagccgg
caaggaacggcccgaatggcggtgcgcatgcagcaagaagctgagcgcagccgcttacgc
ggtagtgtggtcgaaatcctgagctggcatcaacgaacacagacttctgcaacaccgaat
gccaatgccgatctggaaaagttagcgacgagggcaaaacaggcccgccatgaggcgaaa
gaatatagaagctggggaatgccggaacaagcaaaactggctgaagcgcaagccgaacag
cttgaacaggctattcaggccgcgaccggtggcaaagctgcgactattctggtttcgcgg
acctggattgaaatggttaatgaacttaaagagaaagccgatattcgcggtcctattctg
caatataaccactatctgaagcctgaaattttcaatgaaaatggcgggccgctgaagctt
tctgaaatgttgttattccgggagtttatgcgccggcccaaacgaactaacagcctggaa
acgcagggattagttcaggttggttatcaggggctggagaagatccataagatgccggtg
cattggcaagagaaagggctgacgctggatgactggaaggattttcttaaggttacgctg
gatctctacgtacgtgaaagcaacttcacacaactggacgatgagttgaaaaactggatt
ggtagccgtttttcatcgaaattcgtccgtaacccggacacaaaagatcccgaagataat
cagaacagacgctggccgcaaattcgtaatggcaatatatcccatcgtttagtgaagtta
ttaatgcttggcgcaggattcaaaaccgtaaatacggcgacgatggatattatcaatacg
tggctgaaagaagcgtggacccaacttactgggccacttgcagtgctgaaacctgatggt
aaccgtttctatctgccaaaagagcacatgactttttctttaatcacagatgcctggatt
tgtccggtaaccaataagattctggatacggcctttaaaggcttaaccccttatctgccc
acccacatttcgtttgaacaccttaccaagacacaatatgacgcttttgtcgcacaaaag
gtcaccatgccggaaatctggaagctggatcgttcgcaagaagactacgctccgggtctg
gcgaaggtacgtgactgggttagtaaagaaccactgatcgcacaattacgttcggaaaac
gtctggacggatatcaacgatcgtgtcgttgaaggtggcttctactaccgcactgcagag
cactctgcccagcagtcttcagaacgtttgcaaagctacgaaaagatgttcaagaacggg
cagcttaatgttcttaactgttctaccaccatggaaatgggggttgatatcggtggcatt
accgccgtagtgatgaacaacgtaccgccccatccggctaactatttacagcgtgccggg
cgagccgggcgtagtcaggaatcgcgtgcgatctcttacacactatgtaaagggaacccg
cacgatcaacaggtttttgccaacccactctggccatttgagaccatgatccccgcgcca
atggtggcaatgaattccgcccggctggtgcaacgccacgttaatgcgctattactgtcc
gactttttatgtcacgtcattggcgaaacggataaagaaaaaaccagtctcgatagcctc
tggtttttcggtgaagacgacgggcaatcaaagtgtgaacgctttaaagtctggctcgag
cgtccggttcttgatatcgacgcggcgctggaacggctggtgaaaggcacagcattacat
ggtgccagacccgacctgttgcgagataaaacaatccatgcgattacgttcatgcagcag
cgatggctttccgtctaccgcgatcttgtagcccaggagcgagagtcgcagccacaaaca
ccttatcgcaagcgcatagaactggagaaaaaacgacactgtggcgagtatttgctgcgt
gacctggcggccaggactttcctgccgggatacggcttcccgacagatgtggtgacgttt
gataacttcactatggaagactatatccgtgaaaaatcacagaaaaaccgggataaaaaa
gatcgcgaagataatgtgtcacgttataagggacttccctcgcgtaacctgggcgttgcc
atccgtgaatatgcaccaggtgcagagatcatactggatggccgggtcttccgctctgct
ggcgtctcactgcactggcacaatattaatgccgataccaatgaagcccagcgtctggat
tgcgcctggcgctgtcacaaatgcgggaccataggctatgaagaggggttgagcagttcc
gggacgctattttgcaccaacagcgcctgtggtgaaaaaatcatcatggataatcgtcgc
caggtgctgcagccagccgggtttgtaactgatgcgcacgcgccggtgacgaacaatatt
gaaaccatgaaatttatcccggttgtccctgcctgggtatttgttaaagcagaacccgca
tcgctacccaacccgataatggggtatatggcatctggcgctgatgggcatgttttccag
caaagccttggagaaggtgggcatggttacgcactttgcctgagctgcggtcgcgcagag
tcgatgttgaacgcaaacgatgcgccgaaaagtatggaagcccactacccgccgcgtccg
ggaaaagcggatcgcgacagccagaatcaacgtctaatttgccccggttcgacggcgctc
atgaagaacgtcacgctgggggcattggcgcgaacggatgtctttgaaatggttctacgc
aagccgcaaaacggtgaatatctgccggatagcacggaagaaggccggattgttgccatg
actctggcggttgccctacgtcaggcgctggccggggttttgggtatctccgcggcagaa
ctgggctacgccgtgcgtccggtcagactggaagatggacaatcagtattagccgttcaa
ctctacgatgtgattagcggtggtgcaggttttgcatccagtgcgccaatgcacattgag
gccattctgttgggaatggtgaagcagttgggttgccaccactgcgatacggcatgcagt
gaatgcctcctcgactcccagactcgccacgatcacgatttgctggatcgtaaagcagca
caggcatggcttggtgatgacttctcgtactacatcggtttgccggatgatgaaacattc
tcgctaccggatgcccgatattgcccgggagccattggcgatacccttcgtcgggcgatt
aacgagggtgctgaaaaactcacactgtggatgaatgggccactcaatgagtgggatctt
tatgcccgtcaattccgggcggctattcagaactaccggattaaagacaatgttgcggtc
gaccttgtcattcctgctggcgtcgatgatccggagctgttgcatgagctttcgcagttt
actgctttgggcgtgcgtttgtgtcatagcgaacaggctctggaattgccgattgttgcg
caagtcgcctttgccgatcgcgtaatgacgctggcttcacgcagccagcaggcaactatc
ccagggccaggctggcacctgaatgacgaactggtcgttcgcagcctcggctataacacg
gtaaaactgaacgagtttgttttgccggggaaagcagcgaacgcggttgagcgtgtcaaa
gacatagagattcataaacagttaaatggtccactttcgcagttcggacaacgcttctgg
gatttgctgtgtaacaaccatgaagaagcacagtcactgatgaaaaaccagcgaatcacc
agcgttcactataccgatcgctatctgcaaaacccggttgcgctggcactgctgggggcg
atactgaaaccgctaaaaacaaagctgaccgatgacgcggagcttgagcttgatactctg
tttaagcccaaagatcgttcaggaaatcgcccctctcatgactggatgagcgaagcggat
tttcaggatttcgccgaccagtggtttactgcggcaatgggcagagcggtagaactgacg
gtgttcgattcgccacgtgatattccacatcatcgtaagctgacggtgacctttgaagat
agtcagatgttgaagattcgcttcgaccagggaatgggatactggcgtatcgacttcccg
tatgcatggcgtaactttgactttactgatgatgtgacttatcagctagtaaaactggcg
caagcctgccaggagggcaaagtccttaatagcgaggaaagctgggcaacggatgtgctg
gtagaggtgatgccgtcttaa
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