KEGG   Citrobacter sp. TSA-1: HF677_020515
Entry
HF677_020515      CDS       T09275                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
cib  Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:cib00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cib02048]
    HF677_020515 (hsdR)
Enzymes [BR:cib01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HF677_020515 (hsdR)
Prokaryotic defense system [BR:cib02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HF677_020515 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C HSDR_N DUF4145 SLFN-g3_helicase AAA_19 UvrD-helicase
Other DBs
NCBI-ProteinID: QKE21942
LinkDB
Position
complement(4305009..4308521)
AA seq 1170 aa
MMTKSNFEFLKGVNDFTYAIACAAENNYPDDPNTALVKMRMFGEATAKHLGLLLDIPLCE
NQHDLLRELGKISFVDDNILSVFHKLRRIGNQAVHEYHNDLDDAQMCLRLGFRLAVWYYR
LVTKDYDFPVPVFVLPEHGEDRYHAEVLTLKQQLEQQTQEKVQSQAELEAQQQRLIALNG
YIAVLEGKQQETEAQTKARVAALEAQLAAKNAELAKQTEQERKAYHKEITDQAIKRTLNL
SEEESRFLIDAQLRKAGWQADSKTLRFSKGERPEPGVNKAIAEWPTGKDETGKQGFADYV
LFVGLKPIAVVEAKRKNIDVPGKLNESYRYSKYFDNAFLRDTLLEHYSPDEVHEAVPAYE
ISWQDTSGTQRFKIPFCYSTNGREYRAAMKTKSGIWYRDVRHTTNMSKALPEWHRPEELL
DMLGSDPQKQNQWFTDNPGMNELGLRYYQEDAVRAVEKAIVKGQQAILLAMATGTGKTRT
AIALMFRLIQSQRFKRVLFLVDRRSLGEQALGSFEDTRINGDTFNSIFDIKGLTDKFPED
STKIHVATVQSLVKRTLQSDEPMPVGRYDCIVVDEAHRGYILDKEQTEGELQFRSQLDYV
SAYRRILDHFDAVKIALTATPALHTVDIFGEPVYRYTYRTAVIDGYLIDQEPPIQIVTRN
AQDGVYLSEGEQVERLNPQGELINDTLADDQDFEVADFNRGLVIPAFNRAVCGELTKYLD
PTGQQKTLVFCVTNAHADMVVDELRTAFKKKYPQLEHDAIIKITGDADKDAKKVQSMIVR
FNKERLPNIVVTVDLLTTGVDIPSICNIVFLRKVKSRILYEQMKGRATRLCPSVGKTSFK
IFDCVDIYSSLESVDTMRPVVVRPQVELQTLVNEITDSETYKNIEADGRSFAEHSHEQLV
AKLQRIIGLATYNRDRSEAVDKQVRRLDELCLDAAGVNFGGLASRLREKGPHWSAEIFNK
LPGFIARLERLKTDINALRDAPIFLDIDDEVVSVKSLYGDYDTPQDFLEAFDALVQRSPN
AQPALQAVINRPRDLTRKGLVELQEWFDRQHFEESSLRSAWKATRNQDIAARLIGHIRRA
AVGDALKSFDERVDHALARIKGENDWSEEQLSWLDRLAQALKEKVVLDDDVFKTGNFHRR
GGKPMLQRTFDDNLDSVLDKFSDYIWDELA
NT seq 3513 nt   +upstreamnt  +downstreamnt
atgatgactaaatccaattttgagttcctgaagggcgtcaacgatttcacctatgccatc
gcctgtgcggcggaaaataattacccggatgatcccaacaccgcactggtgaaaatgcgt
atgtttggcgaagcgacggctaaacaccttggcctgctgctggatatccccctctgtgag
aatcaacacgatcttctgcgtgaactgggcaaaatttcctttgttgatgacaacatcctt
tctgtattccataaattgcgccgaattggtaaccaggccgtccacgaataccataatgat
ttggatgatgctcagatgtgcctgcgcctgggtttccgtcttgccgtctggtattaccgg
ttggtaaccaaagattacgactttcctgtgccggtttttgtgctgcctgagcacggtgag
gatcgctaccacgccgaagttctcactctcaaacagcaactggaacagcagacacaggaa
aaagtacaaagccaggcagaactggaagctcagcagcaacgattaattgcacttaacggc
tacattgccgttctcgaaggcaaacagcaggaaaccgaagcacaaaccaaagcacgcgtg
gccgcactggaagcgcaacttgccgccaaaaacgccgagttagcaaaacaaaccgaacag
gaacgcaaggcatatcataaagagattaccgaccaggctatcaagcgcacactgaatctc
agcgaggaagaaagccgcttcctgattgatgcccaactgcgtaaagcgggctggcaggcc
gatagtaaaacgttacgtttctccaaaggcgagcgtccagaaccgggtgtaaataaagcc
attgccgaatggccaactggcaaagatgaaaccgggaagcaaggttttgcggattatgtt
ctgttcgtgggccttaagcctatcgcagtggtcgaagcaaaacgtaaaaatatcgatgtt
cccggcaaactcaacgaatcgtatcgctacagtaaatacttcgataacgcgttcttacgc
gacacgctgttagaacactactctcctgatgaagtacatgaagcggtacctgcttacgaa
attagctggcaggacaccagcggcacacagcgttttaaaatccccttttgctactccacc
aacgggcgtgaataccgcgcggcaatgaagaccaaaagcggcatctggtatcgcgacgtc
cgccacaccaccaatatgtcgaaagcgctgccggaatggcatcgcccggaagagctgctg
gatatgctggggagcgacccgcagaaacaaaatcagtggtttaccgataatcctggcatg
aacgaactggggctacgttattatcaggaagatgccgttcgcgcggtggaaaaggccatt
gttaagggccagcaagcgatcctgctggcgatggcgaccggtaccggtaaaacccgtacc
gccatcgccctgatgttccgcctgatccagtcgcagcgtttcaaacgcgtcttgttcctg
gttgatcgtcgctcgctcggcgagcaggcgctgggatcgtttgaagatacacggattaac
ggcgacacttttaacagcatttttgatatcaaaggattgactgataaattcccggaagac
agcaccaaaattcacgtcgccacggttcagtcgctggttaaacgcacgttgcaatcagat
gaaccgatgccggtcggccgttacgactgtattgtcgtcgatgaagcgcaccgcggctac
attctcgataaagagcagaccgaaggcgagctgcagttccgcagccagctggattatgtt
tccgcctaccgccgcattctcgatcatttcgatgcggtaaaaattgccctgaccgccacg
ccagccctgcacacggtcgatattttcggcgagccggtttaccgctacacctaccgaacg
gcggtgatcgacggctacttgatcgaccaggaaccgcctattcagatcgtcacccgcaac
gcgcaggatggcgtctatctatccgaaggcgaacaggtggaacgcctgaacccgcagggc
gagctgatcaacgacacgctggccgacgatcaggattttgaggtcgccgattttaaccgt
ggcctggtgatcccggcgtttaaccgcgcggtatgcggcgagctcaccaaatacctggat
cccaccgggcagcaaaaaacactggtattctgcgtcaccaacgcccatgccgacatggtg
gttgacgagctgcgtaccgcgtttaagaaaaaatatccacagctggaacacgacgcgatc
atcaagatcaccggcgatgccgataaagatgcgaaaaaagtgcaaagcatgatcgtccgc
ttcaacaaagagcggctgcccaatatcgtagtcaccgtcgatctgctgaccaccggcgtg
gatatcccgtctatctgcaatattgtgttcctgcgcaaagtcaaaagccgcattctctac
gagcagatgaaaggccgcgctacacgtctgtgcccgtcggtggggaaaaccagctttaag
attttcgactgcgtggatatctacagctcgctggaaagcgtcgacaccatgcgcccggtg
gttgtgcgtccgcaggtggagctgcaaacgctggtcaatgaaattaccgactcagaaacc
tacaaaaacatcgaagcggatggccgcagctttgccgaacacagccatgaacagctggtc
gccaagctgcagcggattatcggtcttgccacctataaccgcgatcgcagcgaagcggtg
gataagcaggttcgccgtctggacgagctgtgcctggatgccgcgggcgtcaacttcggc
ggcctggcttcgcgcctgcgggaaaaaggaccgcactggagcgccgagattttcaataag
cttcccggctttatcgcgcgcctcgaaaggctgaaaaccgatatcaacgccctgcgtgat
gcccccattttcctcgatattgacgatgaggtggtaagcgtcaaatcgctgtacggcgat
tacgacacgccgcaggatttcctcgaagcgtttgatgcgctggtgcagcgctccccgaac
gcccagcccgcgctgcaggcggtgatcaatcgtccgcgcgacctcacccgtaaagggctg
gtggaattgcaggagtggtttgaccgccagcattttgaagagtcctccctgcgcagcgca
tggaaagcgacgcgcaatcaggatatcgccgccaggctgattggtcatatccgccgtgcg
gcggtgggcgatgcgctcaaatcgttcgacgagcgtgtcgatcacgcgctggcacgtatc
aagggcgagaacgactggagcgaagagcagctaagctggctcgaccgtttagcgcaggcg
ctaaaagagaaagtggtgctcgacgacgacgtcttcaaaaccggcaatttccaccgccgc
ggcggtaagcccatgttacagcgcacctttgacgacaacctcgacagcgtgctggataag
ttcagcgattacatctgggacgaactggcttaa

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