Citrobacter sp. TSA-1: HF677_020715
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Entry
HF677_020715 CDS
T09275
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib00230
Purine metabolism
cib00240
Pyrimidine metabolism
cib01100
Metabolic pathways
cib01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
HF677_020715 (nrdD)
00240 Pyrimidine metabolism
HF677_020715 (nrdD)
Enzymes [BR:
cib01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
HF677_020715 (nrdD)
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Ortholog
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Gene cluster
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
PSV_ORF131-like_dom
ExsD_M
Zn_Tnp_IS91
Anti-TRAP
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-ProteinID:
QKE21979
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Position
4350765..4352903
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AA seq
712 aa
AA seq
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MTPHVMKRDGCKVPFKSERIKEAILRAAKAAGVDDADYCATVAEVVSSQMNERSKVDINE
IQTAVENQLMSGPYKQLARAYIEYRHDRDIQREKRGRLNQEIRGLVEQTNSALLNENANK
DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL
KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTESF
NKHRKTAEEWQIPDADGYAHSRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS
WESRLIQQSILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKFGDPNYDIKQLALECASKR
MYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEA
HGDEATFWKLLDDRLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLKADDDVSEIF
KNGRASISLGYIGIHETINALFGDKHVYDSEQLRAKGIAIVERLRQAVDQWKDETGYGFS
LYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPL
ASGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGF
TCPKCGNHDAARVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgcatgtgatgaaacgagatggctgtaaagtgccgtttaaatcagagcgcatc
aaagaagccattctgcgtgcagctaaagcagcgggagtcgatgacgcagattactgtgcc
accgtcgcagaagtcgttagtagtcagatgaatgagcgcagcaaggtcgatatcaacgag
atccagacagcggtagaaaaccagctaatgtctggcccgtacaaacaactcgcccgtgcg
tacatcgaatatcgccacgaccgtgatatccagcgtgaaaaacgtggccgtctgaaccag
gaaattcgtggtctggttgagcaaaccaactctgctctgctgaatgaaaatgccaacaaa
gacagcaaagtaatcccaacccagcgcgacctgctggccggtatcgttgccaaacactat
gcgcgtcagcacctgctgccgcgtgatgtcgtccaggcgcacgagcgtggtgatattcac
tatcacgatctcgactactctccgttcttcccaatgtttaactgcatgctgatcgacctg
aaaggcatgctgacgcagggctttaagatgggtaacgcggagattgaaccgccaaaatcc
atctctaccgcgaccgccgtcaccgcgcaaattatcgcgcaggtcgccagccatatttat
ggcggcaccaccattaaccgtattgatgaagttctcgcgccgttcgtcaccgagagcttt
aataaacatcgtaaaaccgctgaagagtggcaaatcccggacgccgacggttatgcccat
tcccgtaccgagaaagagtgctacgacgcattccagtctctcgagtatgaagtgaacacc
ctgcataccgccaacggtcagacgccgttcgtgacctttggttttggcctgggaaccagc
tgggaatcgcgtttgatccagcagtccattctgcgtaaccgtattgccggcctgggtaaa
aatcgtaaaaccgcagtgttcccgaaactggtgttcgcgattcgtgacggtctgaaccac
aagtttggcgatccgaactacgacatcaagcagctggcactggagtgcgcgagcaagcgt
atgtatccggacatcctgaactacgatcaggtggtcaaagtgaccggctcgttcaaaacg
ccaatgggctgtcgcagcttcctcggcgtgtgggaaaacgagaacggcgagcagattcac
gacggacgtaacaacctcggcgttatcagcctcaacctgccgcgtatcgcgctggaagcg
catggcgatgaagccaccttctggaaactgctcgacgatcgtctggtgctggcgcgtaaa
gcgctgatgacccgcattgcgcgcctggaaggcgtgaaggcccgcgtggcgcccattctg
tatatggaaggggcctgcggcgtgcgtctgaaagcggacgatgatgtgtcagaaatcttt
aaaaatggtcgtgcatccatctctctgggctacatcggtattcacgaaaccatcaatgcg
ctgtttggcgacaagcatgtgtatgacagcgagcagctgcgcgccaaaggtatcgccatt
gtggaacgcctgcgtcaggcggtcgatcagtggaaagacgagactggctacggctttagc
ctgtacagcacgccaagtgaaaacctgtgcgaccgtttctgccgtctggataccgccgaa
tttggcgtggtcccgggcgtgaccgacaaaggctactacaccaacagcttccacctcgac
gtggagaagaaggttaacccgtacgacaagatcgatttcgaagcgccgtacccgccgctg
gcaagcgggggcttcatttgctacggcgaatacccgaatattcagcacaacctgaaagcg
ctggaagacgtctgggattatagctatcagcacgtgccctattacgggaccaacacgcca
atcgatgaatgctacgagtgcggctttaccggtgaatttgagtgcaccagcaaaggcttt
acctgcccgaaatgtggtaaccacgacgccgcccgcgtatcggtcacccgccgcgtctgc
ggttacttaggcagcccggacgcacgtccgtttaacgccggtaagcaggaagaagtgaag
cgccgcgttaagcatttagggaacgggcagatcggttaa
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