Citrobacter sp. TSA-1: HF677_020860
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Entry
HF677_020860 CDS
T09275
Symbol
tamB
Name
(GenBank) autotransporter assembly complex protein TamB
KO
K09800
translocation and assembly module TamB
Organism
cib
Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cib02000
]
HF677_020860 (tamB)
Transporters [BR:
cib02000
]
Other transporters
Pores ion channels [TC:
1
]
HF677_020860 (tamB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
AsmA
DUF6230
Motif
Other DBs
NCBI-ProteinID:
QKE22008
LinkDB
All DBs
Position
complement(4381176..4384952)
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AA seq
1258 aa
AA seq
DB search
MSLWKKISLGVLIFILLLLGTVAFLVGTTSGLHLIFKAANRWVPGLEIGQVTGGWRDLSL
KNIRYDQPGVAVNAGEVHLAVGLNCLWDSSLCVNDLSLKNINVAIDSKKMPPSAPVEEEE
SGPLNLSTPYPITLSRVALNNINIKIDDTTVSVLEFTSGLNWQEKTLTLKPTSLQGLLIA
LPKVAEVAQEEVVEPKIQNPQPDEKPLGETLKDLFSKPVLPEMTDVHLPLNLNIEAFRGE
QLRVTGDTDLTVHNMLLKVSSIDGNMKLDALDIDSNQGTVKASGTAQLTDTWPVDITLNS
TLNVDPLKGEKVKLKVGGALREQLEVGVNLSGPVDMDLRAQARLAEAGLPLNLEVVSKQV
YWPFTGDKQFQADDIKLKLTGKMTDYTLSMRTAVKGQDIPPATITLDAKGNEQQINLDKL
SVAALEGKTELKALVDWQQAISWRGQLTLDGINTAKAIPEWPSKLNGLVKTRGSLYGGSW
QMEVPELKLTGNVKQNKVNVHGSLKGNSYLQWTIPGLHLELGRNSADVKGELGVKDLNLD
ATIDAPSLDNALPGLGGTAKGLVKVRGTVEAPQLLADITARGLRWQELSVAQVRVEGDVK
SAEQIAGNLNVRVERIVQPDVNIGLVTLNAKGSEKQHELQLRIQGEPVSGQLSLAGSFDR
KEQRWKGALSDTRFQTPVGPWSLNRPVALDYRNQEQKISIGPHCWNNPNAELCVPQTIDA
GAQGRAVVNLNRFDLAMLKPFMPDTTQASGVFTGKADVSWDTTKEGLPQGQVTLSGRNVK
VTQSVNDAPLPVAFETLNLTADLHNNRAELGWLIRLTNNGQFDGRVQVTDPQGRRSLGGN
VNIRNFNLAMVNPIFSRGEKAAGVINANLRLGGDVQSPQLLGQLQLSGLDVDGNFMPFDM
QPSQLAVNFTGTRSTLAGVVRTQQGEINLSGDADWSQIDNWRARVAAKGSRVRITVPPMV
RLDVSPDVVFEATPSLFTLDGNVDVPWARIVVHDLPESAVGVSSDMVMLNNNLQPEKPQT
AGIPINSNLNIHVGNNVRIDAFGLKARLTGDLKVVQDKQGLGLNGQINIPSGRFHAYGQD
LIVRKGELLFSGPPDQPLLNIEAIRNPEATEDDVIAGVRVTGTADEPKAEIFSDPAMSQQ
MALSYLLRGQGLDSEQSDSAAMTSMLIGLGVAQSGQVVGKIGETFGVSNLALDTQGVGDS
SQVVVSGYVLPGLQVKYGVGIFDSLATLTLRYRLMPKLYLEAVSGVDQALDLLYQFEF
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatggaagaagataagcctcggcgtgctgatttttatcctgctgttgttaggc
acggtggcgttcctcgtcggcaccacttcgggcctgcatctgatcttcaaagcggcgaat
cgttgggttccggggctggagattggtcaggtcaccggcggctggcgggatttatcgctc
aaaaatattcgttatgaccaacctggcgtggcggtgaatgctggcgaagtgcatctggcc
gtggggcttaactgcctgtgggacagcagcctgtgcgtcaacgatctgtcgctgaaaaat
atcaacgtggcgatcgacagcaaaaagatgccgccatcagcgccggttgaagaggaagag
agcggtccgcttaacctttccacaccttacccaatcacgctttcgcgcgtggcgctgaac
aacatcaatatcaaaatcgatgacaccacggtttcggtgctggaatttacctccggcctg
aactggcaggaaaaaacgctaaccctgaagccaacgtcattacaggggctgctgattgcc
ctgcctaaagtggcggaagtggcgcaggaagaggttgtcgaaccaaagattcaaaatccg
caaccggatgaaaaaccgctcggcgaaacgctaaaagatctgttctcaaagccggtgctg
ccggaaatgaccgatgtccatctgccgctcaatctcaacattgaagcgtttcgcggcgag
cagctgcgcgtgaccggggatacggatttaacggtacataacatgctgctgaaagtgagc
agcattgacggcaacatgaaactcgatgcactggatatcgactcgaatcaggggacggta
aaagccagcggcacggcgcaactgaccgacacgtggccggtcgatattacgttaaacagc
acgctcaacgtcgacccgttaaaaggcgaaaaggtgaagctgaaggtcggcggcgcgctg
cgtgaacagctggaagtcggcgtaaatctgtctggtccggtggatatggacctgcgggcg
caggcgcgtctggcggaagccggattgccgctcaaccttgaggtggtgagtaagcaggtt
tactggccgtttactggcgacaagcagttccaggctgatgacatcaagctcaaactgacc
ggtaagatgaccgactatacgctgtcgatgcgtaccgctgtgaaagggcaggatattcct
ccggctaccatcacgctggacgccaaaggcaacgaacagcagatcaatctcgacaaactc
agcgttgcggcgctggaagggaaaactgagctgaaagcgctggtggactggcagcaggcg
atcagctggcgcgggcagctaacgctggatggcatcaacacggcgaaagcgatcccggag
tggccatcaaaactgaatggcctggtgaaaactcgcggcagtctgtacggcggaagctgg
cagatggaggtgcccgagctgaagctgaccggcaacgtgaagcagaacaaggttaatgta
cacggttcgctgaagggtaacagctacctgcagtggacgatcccgggcctgcatctggaa
ctgggacgcaacagcgcggatgtgaaaggggaactgggggtcaaagacctcaatctcgac
gcgacgattgatgccccgagcctggataacgcgctgccgggactgggcggtacggcgaaa
gggctggtaaaagttcgcggtacggttgaagcgccacagctgctggcggatatcaccgct
cggggtctgcgctggcaggagctgtccgtcgctcaggtgcgtgtcgaaggcgacgtgaaa
tcggcagagcaaatcgctggtaatctcaacgttcgcgtagagcggattgtacagcctgac
gtgaatattggcctggtgacgctcaatgccaaaggtagcgaaaagcagcatgagctgcag
ctgcgcattcagggggaaccggtctccgggcagctctccctggcaggtagctttgatcgc
aaagagcagcgctggaaaggtgcgttaagcgatacccgcttccagacgccggtcggtccg
tggtcccttaaccgccctgtcgcgctggattatcgcaatcaggaacagaaaatcagcatt
gggccgcactgctggaacaacccgaatgcggaactgtgcgtaccgcaaaccattgatgcc
ggtgcacaaggacgcgcggtggtgaaccttaaccgctttgacctggcgatgctaaaaccg
tttatgccggatacaacccaggccagcggcgttttcactggcaaagctgatgtgagctgg
gacaccaccaaagaggggctgccgcaggggcaggttacgctgagcggacgtaatgtgaag
gtcacgcaaagcgtgaacgatgcgccgctccctgtggcgtttgaaacgctgaatctgacc
gccgacctgcacaataaccgtgccgagctgggctggctgattcgcctgaccaacaacggg
cagtttgacggccgggtgcaggtgacggatccgcaaggacgccgcagtctcggcggcaac
gtcaacatccgcaacttcaatctggcgatggtgaaccccattttctcgcgcggtgaaaaa
gcggctggggtgatcaacgccaacctacgtctgggcggtgatgtgcaaagcccgcagctg
ctcggacagctgcagctgagcggtctggatgtcgacggcaactttatgccgtttgacatg
cagccaagccagttagccgttaacttcaccggaacacgctcaacgctggcgggcgtggtg
cgtacgcagcagggcgaaattaacctgagcggcgatgccgactggagtcagatagacaac
tggcgggcgcgcgttgcggctaaaggcagcagggttcgtattaccgtgccgccgatggtc
cgcctggacgtatcgccggacgtggtctttgaagccacgccgagcctgtttaccctcgat
ggcaacgtggatgtgccgtgggcgcgtatcgtggtacacgacctgccggagagcgcggta
ggggtttccagcgatatggtcatgcttaacaacaatctgcaaccggagaaaccacagaca
gcaggtattccgatcaacagcaacctgaacatccacgtcggtaacaacgtgcgtattgac
gcctttggtctgaaagcgcgtctgacgggcgatctgaaagtggtgcaggataagcagggg
ctggggctgaacggacaaattaatattccgagcgggcgtttccatgcctatggtcaggat
ctgattgtgcgtaagggcgagctgttgttctccggtccgccggatcaaccgttactcaac
atcgaagcaattcgtaacccggaagccaccgaagacgacgtgatcgccggggttcgcgtc
acgggcaccgccgatgaaccgaaggcggagatcttctccgacccggcgatgtcgcagcaa
atggcgctttcctacctgctacgcggacaagggctggatagcgaacagagcgacagcgcg
gcaatgacttcaatgcttattggtctgggggttgcacaaagtggtcaggttgtgggtaaa
atcggggagacatttggcgtaagcaatctggcactggacacacaaggggtgggtgattca
tctcaggtggttgtcagcggatacgtactgccaggtctgcaggtgaaatatggtgtgggt
atatttgactccttagcgacactcacgctacgttatcgtctgatgcctaagctatatctg
gaagcagtgtctggcgtagatcaggcacttgatttgctctatcagttcgagttttag
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