Citrobacter sp. TSA-1: HF677_021235
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Entry
HF677_021235 CDS
T09275
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HF677_021235 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cib03019
]
HF677_021235 (groL)
03110 Chaperones and folding catalysts [BR:
cib03110
]
HF677_021235 (groL)
03029 Mitochondrial biogenesis [BR:
cib03029
]
HF677_021235 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cib04147
]
HF677_021235 (groL)
Enzymes [BR:
cib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HF677_021235 (groL)
Messenger RNA biogenesis [BR:
cib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HF677_021235 (groL)
Chaperones and folding catalysts [BR:
cib03110
]
Heat shock proteins
HSP60 / Chaperonin
HF677_021235 (groL)
Mitochondrial biogenesis [BR:
cib03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HF677_021235 (groL)
Exosome [BR:
cib04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HF677_021235 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HF677_021235 (groL)
Exosomal proteins of breast cancer cells
HF677_021235 (groL)
Exosomal proteins of colorectal cancer cells
HF677_021235 (groL)
Exosomal proteins of bladder cancer cells
HF677_021235 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QKE22077
LinkDB
All DBs
Position
complement(4454978..4456624)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVAAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGDEAAIQGRVTQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVASKIAGLKGQNEDQNVGIKVALRAMESPLRQIVLNCGEEPSVVANTVKAGDGNYGYNA
ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKGDAPDLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaacgacgctcgtgtgaaaatgctgcgcggcgta
aacgtactggcagatgcagtgaaagttaccctcggtccaaaaggccgtaacgtagttctg
gataaatctttcggtgcaccgaccatcactaaagatggtgtttccgtagcccgtgaaatc
gaactggaagacaagttcgaaaacatgggggcgcagatggtgaaagaagttgcctctaaa
gcgaacgacgctgcaggcgacggtaccaccaccgcaaccgtactggcgcagtccatcatc
actgaaggtctgaaagccgttgctgcgggcatgaacccgatggatctgaaacgtggtatc
gacaaagctgtcgctgctgccgttgaagaactgaaagcactgtccgtaccgtgctctgac
tctaaagcgattgctcaggttggtactatctccgctaactccgacgaaaccgtaggtaaa
ctgatcgctgaagcgatggacaaagtcggtaaagaaggcgtgatcaccgttgaagacggt
accggtctgcaggacgaactggacgtggttgaaggtatgcagttcgaccgtggttacctg
tctccttacttcatcaacaagccggaaactggcgcagtagaactggaaagcccgttcatc
ctgctggctgacaagaaaatctccaacatccgcgaaatgctgccggtgctggaagcagta
gcaaaagccggtaaaccactgctgatcatcgctgaagatgttgaaggcgaagcgctggca
actctggttgttaacaccatgcgcggtatcgtgaaagtcgcggcggttaaagcgcctggc
ttcggcgaccgtcgtaaagcgatgctgcaggatatcgctaccctgaccggtggtaccgtt
atctctgaagagatcggtatggagctggaaaaagcaactctggaagatctgggtcaggcg
aaacgcgttgttatcaacaaagacaccaccaccatcattgatggcgtgggtgacgaagct
gcaatccagggtcgcgtgactcagattcgtcagcagatcgaagaagcaacttccgactac
gaccgtgaaaaactgcaggagcgcgtagcgaaactggcaggcggcgttgcggttatcaaa
gttggtgctgcgactgaagttgaaatgaaagagaagaaagcccgcgttgaagatgccctg
cacgcgactcgtgctgcggtagaagaaggcgtggttgctggtggtggtgttgcgctgatt
cgcgtagcgtctaaaattgccggtctgaaaggtcagaacgaagaccagaacgtaggtatc
aaagttgcgctgcgcgcaatggaatctccgctgcgtcaaatcgtactgaactgcggcgaa
gagccgtctgtagtggctaacaccgtgaaagcgggtgacggtaactacggttacaacgct
gcaactgaagaatacggtaacatgatcgacatgggtatcctggatccaaccaaagtaacg
cgttcagctctgcagtacgcggcttctgttgcgggtctgatgatcaccaccgagtgcatg
gttactgacctgccgaaaggcgatgcgcctgacttaggtgctgctggtggtatgggcggc
atgggtggaatgggcggcatgatgtaa
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