KEGG   Citrobacter sp. TSA-1: HF677_021435
Entry
HF677_021435      CDS       T09275                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
cib  Citrobacter sp. TSA-1
Pathway
cib03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cib00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HF677_021435 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cib02044]
    HF677_021435 (tssH)
Secretion system [BR:cib02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HF677_021435 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_22 AAA_16 ClpB_D2-small nSTAND3 ATPase_2 AAA_24 AAA_25 AAA_7 Zeta_toxin IstB_IS21 TniB NACHT bpMoxR Sigma54_activat AAA_14 AAA_30 SRP54 NBD_SMAX1 Hpr_kinase_C
Other DBs
NCBI-ProteinID: QKE22109
LinkDB
Position
complement(4504574..4507237)
AA seq 887 aa
MENSSVMLLRRLNPFCAGALEAAASLCQTRAHAEVTIEHWLLKLLELGESDITVLARRYE
WDISALWQSLLTEIDSLPRSVHSRPSLSKSLLNLIQNAWVIASLDEDIEHIRSVHILAAM
VKQPSLVPNDALWPLMTLSLTQLQRLRPMLDAQSDERPEVQQLAAHNQSLPAEAPLETQS
ANETPAPNVIGNTLNDALLAVLNKFTVDVTEKAREGAIDPVFGRDDEIRQMVDILSRRRK
NNPILVGEPGVGKTALVEGLALRIVEGNVPVSLQTTSLRTLDLGLLQAGAGVKGEFEQRL
KNVIEAVQQSPTPILLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEY
KQYFERDAALERRFQVVKVDEPDDEKACLMLRGLKPRYAKYHGVHITDDAVKAAVTLSRR
YLTGRQLPDKAVDLLDTASARIRMSLDTLPEELTRLKAKRNALELEQQAILDDLAIGNTT
NQSLLSELVTQDAQIAIQLAELEQRFEQEKNLISELLEQRRQSQDVSDIQSQLELVQQNE
PLITPDVDVRTVATVIADWTGVPLSSLLKDEQTELLELEDSLSQRVVGQEKALLALGQRL
RAARTGLASENGPQGVFLLVGPSGIGKTETALALADVLFGGEKSLITINMSEYQEAHTVS
QLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVLNLFYQVFDRGFMRDGEG
REIDFRNTVILMTANLGSDLLMQQLEEFPESTDGELQELLRPTLREHFQPALLARFQTLI
YRPLGPVALRQIVEMKLANVIKRLYTHYKLESIIEEALYDTLVNACLLPDTGARNIDSLL
NQQILPVLSQQLLMRQANHQQAQSLTLGYSEEDGITLNFSDIEEMTL
NT seq 2664 nt   +upstreamnt  +downstreamnt
atggaaaattcttcagttatgttattgcgtcgccttaaccctttctgtgcgggcgcactc
gaagctgcggcatccttgtgtcaaacacgcgcccatgctgaggtgaccatcgaacattgg
ttactcaagctgcttgagctaggagaaagtgatatcaccgtgttagctcgccgctatgaa
tgggatatttctgcactttggcaaagtctgttaacagaaatcgacagcctgccccgttct
gtccacagccgcccctccctctcaaaatcactcctgaatttaattcaaaacgcatgggtg
atagcctcattggatgaagatattgagcacattcgcagcgtccatattcttgcggcgatg
gtgaaacaaccctctttagttccgaacgacgccctttggccattaatgaccttaagcctc
acgcaattgcagcgcttaagaccgatgctggatgcgcaatccgatgagcgccctgaagtt
cagcaacttgcggcgcataatcaatctttgccagcagaagcgccacttgaaacgcaatca
gcaaacgaaactccagcaccgaatgtcatcggcaacacactgaatgatgccttactggcc
gtgctgaataaatttacggtggatgtcaccgaaaaagcacgcgaaggcgcgattgaccca
gtctttggacgtgatgatgaaatccgtcaaatggtggatattctttctcgtcgccgcaaa
aacaacccaatcctcgtgggcgaaccgggtgtcgggaaaaccgcgttagtggaaggctta
gccctgcgtatcgttgaaggtaatgtaccagtcagcctgcaaaccacatcactacgcaca
ttagatttagggctgctgcaagcaggggctggcgtcaaaggcgaatttgaacagcgccta
aaaaacgtcattgaagccgtacaacagtctcctactccgattttactgtttatcgatgaa
gcccataccatcattggcgcaggcaaccaagccggtggcgctgatgccgctaacttactc
aaacccgcccttgcccgtggtgaattgcgtacgattgccgccaccacttggtctgaatat
aagcaatatttcgagcgtgacgccgctttagagcgacgcttccaagtcgtcaaagtcgat
gaaccggatgatgaaaaagcctgtttaatgctgcgggggctaaaaccacgctacgcaaaa
tatcatggtgttcacattaccgatgatgcggtcaaagccgccgtcaccttatcccgccgt
tacttaaccggtcgtcaactccccgataaagccgtggatttgctcgataccgccagcgcc
cgtatccgcatgagcctcgatacactccctgaagaattgacgcgtttaaaagccaagcgc
aatgcattagaacttgaacagcaagcgatccttgatgatttggctattggcaacaccacc
aaccaatccctgctgagcgaactagtcactcaagatgcgcaaatcgccatacaactggct
gagttagaacagcgttttgagcaagaaaaaaaccttatcagcgagctcttagagcagcgc
cgtcaatcccaagatgtcagcgatatccaatcacagttagaactcgttcagcaaaatgaa
ccgctgatcaccccggatgtggatgtcagaacggtggccactgtcatcgccgactggaca
ggcgtgccattatccagcctcttaaaagacgaacaaaccgaactccttgaactggaagat
tctctgagccagcgtgtagtgggacaggaaaaggcattactggcgctgggacagcgcttg
cgggctgctcgcaccggtcttgcctcagaaaatggtcctcaaggggtatttttattagtg
ggtccaagcggaatcggtaaaactgaaaccgcactcgccttggctgatgtcctgtttggt
ggcgaaaaatccttaattaccatcaacatgtccgagtatcaagaagcccataccgtcagc
caattaaaaggctcgcctccgggttatgtgggttatggtcaaggcgggattttaacggaa
gccgttcgcaaacgtccttacagcgtcgtgttacttgatgaggtggaaaaagcccaccgc
gatgtgctcaacctgttttatcaggttttcgaccgtggatttatgcgcgatggtgaaggt
cgtgaaattgattttcgcaataccgtgatcttaatgacagccaacctgggcagtgacttg
ttgatgcagcaactcgaagagttccctgagtctaccgacggcgagctgcaagaactgctg
cgtccaaccttacgggaacacttccaaccggccttactcgcacgcttccaaaccctaatt
tatcgcccattaggccctgtggcactacgtcaaattgttgaaatgaaactggccaacgtc
attaagcgtctttacacccactacaagcttgaaagcattatcgaagaagcgctgtatgac
acgctcgtgaacgcctgtttattacccgataccggcgcccgcaatatagacagcctgctt
aatcaacaaattttaccagtacttagtcagcaattactcatgcgccaggcgaatcaccag
caagcacaaagcctgacgctgggttatagcgaagaagacgggatcaccctgaatttcagt
gatattgaggagatgacgttatga

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