Citrobacter sp. TSA-1: HF677_021580
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Entry
HF677_021580 CDS
T09275
Name
(GenBank) hypothetical protein
KO
K02280
pilus assembly protein CpaC
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HF677_021580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cib02044
]
HF677_021580
02035 Bacterial motility proteins [BR:
cib02035
]
HF677_021580
Secretion system [BR:
cib02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
HF677_021580
Bacterial motility proteins [BR:
cib02035
]
Pilus system
Pilus assembly proteins
HF677_021580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
HL_N-beta
RTT107_BRCT_6
Motif
Other DBs
NCBI-ProteinID:
QKE22134
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Position
4534832..4536091
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AA seq
419 aa
AA seq
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MDVINKTLGGLLLLMFSHACLALDIDVNKTKEYRVDFDIDTVVIGSPDVADFRVVDEHNI
YIFGKTSGQTNIIINGKQGEARTLPISVNDFRGQATVINTLLANEGFKEVKAIDMGNSLT
ISGTVSTSEDIDYIKDLVQEYFSEEQIKYSLFTQKNQQIKIRVTVAEVSKEVTETLGIDW
GQGAVSSNGSDLTISGGLYSSMVKGMSFNSLGIAINALAKNNLANVLTTPSLTVTNGKTA
SFHGGGQIPIFQRSENGSTVEWKDYGVKLNFAPVINTDASISMDVTVESSQIGGYYKYEN
TELPTINTRNVATSVRMRDGESFVLGGLIDNNQAQYVNKVPGLSDIPMFGALFKSIGFNS
GRSELVIFATVEYIKPTEKNTISLPLASFSSPWETFFNINKVTHKSTMELLKEADYVIE
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaattaataaaactcttggcggtttactgttgctcatgttcagtcatgcatgc
cttgcacttgatattgatgttaataaaacgaaagagtacagagttgatttcgacattgat
acagttgttattggttctcccgatgttgcagatttcagagtggtggatgaacataacatt
tatatttttggcaaaaccagcggccagaccaatattattatcaatggtaaacaaggggaa
gcgcgtacgcttccgatttccgtaaatgattttcgtggtcaggctaccgtcatcaatact
ttgctagccaatgaaggtttcaaagaagttaaagctatcgacatgggaaattctttaacc
atcagcggcaccgtcagcaccagtgaagatattgattatataaaagatctcgtccaggaa
tactttagtgaggagcaaataaagtactcactgttcacgcagaagaatcaacagattaaa
atacgtgttaccgtcgccgaagtgtctaaagaggttaccgagacgctgggaattgattgg
ggccagggggctgtctccagtaacggaagcgatttaaccatcagtggtgggctttacagt
tccatggtaaaaggaatgagtttcaactcattaggcattgcaatcaatgcacttgcaaaa
aataatcttgccaatgttctcaccacacccagtctgaccgtgacgaatggcaagacggca
agctttcatggcggcggccagattcctatatttcaacgtagtgaaaatggctcaacggtt
gaatggaaagactatggtgttaaacttaattttgccccggtgataaatacagacgcatct
atcagcatggatgtaaccgttgagtcatcacaaattggtggctattacaaatatgaaaac
acagagttgccgaccattaatacccgaaatgtcgcgacctcggtgcgcatgcgcgatggg
gaaagctttgttcttggtggattaattgataataaccaagctcaatatgtcaacaaggtg
cctggcctgagtgatattcccatgtttggtgcattatttaaatctataggttttaacagt
ggtagaagtgaattggtgatttttgcgacggtagaatatatcaagcctaccgaaaaaaat
actattagtctcccacttgccagtttttccagtccatgggaaacttttttcaatatcaat
aaagtgacccataagtccacgatggaattgttgaaagaggccgattatgtcattgagtaa
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