Citrobacter sp. TSA-1: HF677_024645
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Entry
HF677_024645 CDS
T09275
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib00071
Fatty acid degradation
cib00280
Valine, leucine and isoleucine degradation
cib00310
Lysine degradation
cib00362
Benzoate degradation
cib00380
Tryptophan metabolism
cib00410
beta-Alanine metabolism
cib00640
Propanoate metabolism
cib00650
Butanoate metabolism
cib00907
Pinene, camphor and geraniol degradation
cib00930
Caprolactam degradation
cib01100
Metabolic pathways
cib01110
Biosynthesis of secondary metabolites
cib01120
Microbial metabolism in diverse environments
cib01200
Carbon metabolism
cib01212
Fatty acid metabolism
Module
cib_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HF677_024645 (fadB)
00650 Butanoate metabolism
HF677_024645 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HF677_024645 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HF677_024645 (fadB)
00310 Lysine degradation
HF677_024645 (fadB)
00380 Tryptophan metabolism
HF677_024645 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HF677_024645 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HF677_024645 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HF677_024645 (fadB)
00930 Caprolactam degradation
HF677_024645 (fadB)
Enzymes [BR:
cib01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HF677_024645 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HF677_024645 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HF677_024645 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HF677_024645 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
QKE22856
LinkDB
All DBs
Position
unnamed2:complement(79290..81479)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGHALDVLEKQPNLKGLLLRSN
KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLSAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGAEQALK
IGLVDGVVKQDKLLDGAIAVLRQAINGDLDWKAKRQPKLEPLKLSKIEAAMSFTIAKGMV
AQTAGKHYPAPITAVKTIEAAARFGREEALNLENKSFVPLAHTNEARALVGIFLNDQFVK
AKAKKLTKNVEVPKQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLL
NKQLERGKIDGLKMAGVISTIHPTLDYSGFERVDVVVEAVVENPKVKKAVLAETEDQVRP
DTVLASNTSTIPINELASALKRPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAW
ASQMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMSAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDNKGKP
KKEEDATVDDLLAEVSQPKRDFSDEEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGPLYEVPAGLRDKARHNEPYYPQVEPA
RPVGSLKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttacaaaggcgacaccctgtacctcgactggctggaagatggcatcgccgaactg
gtgttcgatgccccaggctcagtcaataaactcgacacggccaccgttgccagcctgggc
catgcgcttgacgtgctggaaaaacaaccgaatttaaaagggctgctgctgcgttctaac
aaagcagcctttattgttggtgccgacatcaccgaattcctttcactgttcctcgtgcct
gaagagcaactgagccagtggctgcattttgccaacagcgtgtttaatcgcctggaagat
ctgcctgttccgactctctcagcagttaacggctatgcgctgggcggtggctgcgagtgt
gtcctggcgaccgattatcgtctggctacgccggacctgcgcatcggcctgccagaaacc
aagctgggcattatgccaggctttggcggctccgtgcgtatgccacgtatgctgggtgcg
gacagcgcgctggaaattattgctgcgggtaaagatgtgggtgctgagcaggcgctaaaa
atcggtctggtcgatggcgtagtgaagcaagacaaactgcttgatggcgcgatcgcggta
ttacgtcaggcgattaacggcgacctcgactggaaagccaaacgtcagccgaagctggag
ccgttgaaactcagtaaaattgaagcggcaatgagctttaccatcgccaaaggtatggtg
gcgcagacggcaggtaagcattatcccgcaccgattaccgcggtaaaaaccattgaagca
gcggcccgttttggccgtgaagaagcgctgaatctggaaaataaaagctttgttccactg
gcgcacaccaatgaagcccgcgcactggttggaattttccttaacgatcagttcgtgaaa
gccaaagccaaaaagctcaccaaaaatgttgaagtgccaaagcaagcggctgtgctgggc
gcaggcattatgggcggcggcatcgcttaccagtcggcctggaaaggcgtgccggttgtc
atgaaagatatcaacgacaaatcattaacgctgggtatgaccgaagcggccaagctactg
aacaaacagctggagcgcggcaaaattgacggtctgaaaatggcgggcgttatttccacc
attcaccccaccctcgactatagcggtttcgaacgcgtggacgtggtagttgaagcggtc
gtagaaaacccaaaagtgaaaaaagcggtactggcggaaaccgaagatcaggttcgcccg
gacaccgtactggcttcgaatacttccaccatcccaatcaacgaactggccagcgcgctt
aagcgtccggaaaacttctgtgggatgcacttctttaacccggtgcaccgtatgccgctg
gttgagatcattcgcggcgagaaaagctcggatgaaaccatcgctaaggttgtcgcctgg
gcaagccagatgggcaaaacgccgattgtggttaatgactgccctggtttcttcgttaac
cgcgtgctgttcccctattttgccggtttcagtcagttactgcgcgacggggcggatttc
cgcaaagtcgacaaagtgatggaaaaacagtttggttggccgatgggcccggcttatctg
ctggacgtggtaggtattgataccgcgcaccacgcgcaggcggtgatgtccgcaggcttc
cctcagcgtatgcagaaagattatcgcgatgcgatagacgccctgtttgatgctaaccgt
ttcgggcagaaaaacggtctcggattctggcgttataaagaagacaacaagggcaagccg
aagaaagaagaagatgccaccgttgacgatctgctggcagaggtcagccagccgaaacgc
gacttcagcgatgaagagattatcgcccgcatgatgatccctatggtcaacgaagtagtg
cgttgcctggaagaaggcattatcgccagcccggcagaagccgatatggcgctggtatac
ggtctgggcttccctccgttccacggcggtgcgttccgctggctggatacgctcggcagc
gcgaagtatctcgatatggctcagcagtatcagcaccttggtccgctgtatgaagttccg
gccggtctgcgtgataaagcgcgccataacgaaccgtattatccccaggttgagccagcc
cgcccggttggcagcctgaaaacggcttaa
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