Citrus x clementina (clementine): CICLE_v100000451m
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Entry
CICLE_v100000451m CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03440
Homologous recombination
cic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CICLE_v100000451m
03460 Fanconi anemia pathway
CICLE_v100000451m
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v100000451m
Enzymes [BR:
cic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CICLE_v100000451m
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
CICLE_v100000451m
FA (Fanconi anemia) pathway
Downstream FA components
CICLE_v100000451m
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
HBB
Pex19
Motif
Other DBs
NCBI-GeneID:
18043008
NCBI-ProteinID:
XP_006435386
UniProt:
V4TG28
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MVSEANPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLE
SPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTI
PPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKH
YCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNV
GQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIAR
DAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFF
SCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSS
LTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSII
LTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGY
AFQDALGKSIEEICNVVPGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA
VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKVSEGIDFSDDNARVV
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggtctcagaggcaaacccaaaccctaattacagaaagcccctgaatgcgtaccacgtc
gggggaatccaagtggagtttccgtaccaaccatacgggtcgcagcttgtgttcatgtgc
cgcgtgatatcgacgcttgatcgagcgcaaagagacggtcactgtcacgcattactcgag
tctccgaccggtactggaaaatctctctcgcttctttgctcgactctcgcttggcagcag
aattgtaaattaaagaatcagttagcaaacatctctcactccaaacctgataccgaggcc
gtcaccgatcctctggcaaatggtggcggattcatccccgaatcacagccttcaactatt
ccgccgtcaacaaatggccagacggctcaggttgcgatgaacaacaagaatgtgaagaaa
aagatgacgcctacaatattttatgcatcgaggacacattcacaaatttctcaagtgatt
tctgaatacaagaaaactgcttatcgggtgccaatggcagtgttggcttcgcgtaaacat
tattgcacaaacaagtacgtacgtgacaaagagaatattgatgaagaatgcaagctgctt
ttgggggatcgaaatttgggttgtcctcaatttaaaaatgtgcataaagtcagaggtcac
ccatcacttcagaaaggaggttgccatgaggttcatgatattgaagatctggtgaatgtt
ggacaagtcgttagaggatgttcatattatgctgcacgctccatggcagatgatgcgcag
ttggtgttttgtccctacagctacatcattaatcctgtcattcggggtgctatggaagtt
gatattaaaggagccattttaattcttgatgaagcccacaatatcgaagacattgcccgt
gatgccggtagtgtggatattgatgaagatgttttgctaaaattgcagatggaactagag
caagtgtgctctgttaatcccatgatttaccaaccattaattgaaatgacccaggacctc
gtaggctggattgagcgcaggaaagcaacattagcaaagcgggaatttcagcacttcttc
tcttgttggactggtgataaagctttaagagaactccaagaagctaacatctcacggcag
tgctttccaatattgctagaatgtgccacaaaggcaatcaaagaagctacagacacagaa
tcagagttacctcatctgagtggcatgtcagtcataacattggaagggttattctcctca
cttacctatttcttctcaagaaacggttctcatgtatctgattatcagcttgctttacag
aaatatattaaaagagattcaaaaaaccctggtggaaactggacacatactttaagtttg
tggtgcttgaatccagctgttgttttcaaggatgttgctgagctttctttgtctattatt
ttaacatcggggaccttatcaccaatgaattccttctcttctgagcttggagttcaattc
ggaacttgtctggaggctccgcatgtcatcgatgttgatttgcaggtgttgacttctgta
atctccactggtccagataattatccattgaatgcaagttataaaactgcagatgggtat
gcttttcaggatgcccttggcaaatctatagaggaaatatgcaacgttgttcctggccaa
tggtctcgacttaatgcaaagaaacctctttttgtggagccaaaagggggaagccaggaa
gactttgagattgttttgaagcattattacaactcaatttcacaaggcagtaaatgtgct
gttgtgagaaagaaaagagttaagagagaaggcaataatgacttaaacacaattgagtct
caggaaaatgctaataagaaaggagccagtttccttgcagtttgccgtggaaaggtttca
gaaggaattgacttcagcgatgataatgctcgagtggtt
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