Citrus x clementina (clementine): CICLE_v10000078mg
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Entry
CICLE_v10000078mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CICLE_v10000078mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10000078mg
Enzymes [BR:
cic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CICLE_v10000078mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CICLE_v10000078mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Pox_LP_H2
FtrD-like
Motif
Other DBs
NCBI-GeneID:
18041007
NCBI-ProteinID:
XP_006432385
UniProt:
V4T2Q0
LinkDB
All DBs
Position
Unknown
AA seq
1149 aa
AA seq
DB search
MGLMQVEESPKDEQLPDKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGI
RKIVRANDRIVSGIDPSIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVN
IEYVQGSHTEKTTMEKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIK
GTEKVLLIQEQLSKNRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVK
KIPIMVVMKAMGMESDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVK
RSTFGSPPNDREGRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDD
KDYVGNKRLELSGQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSIT
VGLERTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQ
PSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELH
NPNSFLVIFNGLILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRV
CRPLVIADKGISRIKEHHMKELSDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATP
DTTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLL
VYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVV
KKYTAINQKYANSTSDRILRPDRTGPGSERMQILDDDGLAAPGEIIKPNDVYINKESPLE
TRGSIMSPTGQTDSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPEL
GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGV
SCGRFHYGSAFGEPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIY
YQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERL
MVSSDPFEVQVCRVCGLLGYYNHKLKAGICSTCKNGNNISSMKLPYACKLLIQELQSMNI
VPRLKLAEA
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgatgcaagtagaagagtctcccaaagatgagcaattaccagacaagcaaaag
ctcgctgctcccgtgaaatctgtagtggataaattccaacttcttcctgagttcttgaag
gtcagagggctggtgaaacagcatttggactcattcaattactttgttaatactggtatt
aggaagattgttcgtgcaaatgatcgtattgtgtccggaattgatccaagtatattcctc
aggtttaaagatgttagaattggccagccgtctatgactgtggatggtgttagtgaaaaa
cttaatcctcacatgtgccgcttatctgatatgacctatgctgcgcctatattggtcaat
attgaatatgttcaaggaagtcataccgaaaagaccaccatggagaagaatgatgttgtc
attggaagaattcccatcatgttgcggagttgtcgctgtgtcttatatggaaaggatgaa
gctgagctggcaagacttggtgagtgccctcttgatcctggtggatatttcatcattaaa
ggaactgagaaggtgctattaatacaagaacaactttcgaagaacagagtaattattgac
actgacaagaagggcaatataaatgcatctgttacaagtagcacagagacggtgaaaagc
aaaacagttatccaaatggagaaggggaagatgtatttacttcttaatcaatttgtgaaa
aagattcctatcatggttgtaatgaaggctatggggatggaaagtgatcaagaggttgtt
cagatggttggaagagatcctcgatatagtgccttacttttgccttcaattgaggaatgt
gcaaacctggatatatatacacaagagaaagcgttggagtatcttgagggaaaggtgaaa
aggtctacatttggtagtccaccaaacgatagggaaggaagagctttttctattcttcga
gatgtgtttcttgccaatgtccctgtgcataacaataacttccgtccaaaatgtttttat
gttgcggtcatgttgagaagaatggtggaggcaatgttaaataaggatgcaatggatgac
aaggattatgtggggaataaacggctggagttatcaggccaattagtttcattgcttttt
gaggatttgttcaagacaatgattagtgaggttcagaagacagtagatatcatcctatca
aagcctagccggtctagccgatttgatctttctcaatttatagttagagacagtatcact
gttggtcttgaaaggaccctttctactggcaactttgacgtcaagcggttcaaaatgcac
cggaaaggcatgacgcaggtgctggctaggctatcattcattgggactctgggccacatg
actagagtatcgccacaatttgaaaaatctaggaaagtaagtggacctagagcattgcaa
cccagccagtggggtatgctttgtccatgtgatactccagaaggtgaagcttgtggactg
gttaaaaaccttgctcttatgactcatgtcacaactgatgaagaggaaggtccattaatt
tctttgtgctattgtttgggagttgaggatttggaacttctctctggagaagagcttcac
aatccaaattcatttctggttatatttaatgggcttattcttggcaagcataggaggcct
aagtgttttgctgatgtaatgagaaagctgcgtagagctggcaaaattggcgagtttgtt
agtgtctttgtaaatgagaagcagcgttgtgtttacattgcttctgatggaggccgtgtt
tgtcgtccacttgtcattgctgacaagggcatatcaaggatcaaagaacaccatatgaag
gagttgtcggatggagtccgcagctttgatgactttttacgtgagggattgatcgagtat
ctcgatgttaatgaggaaaataatgctctgatagctttatatgaaggagatgctacacct
gatacaacccatattgagatagagcctttcacaatcctaggtgttattgctgggctaatc
ccatatcctcatcataatcaatcaccaagaaatacctatcagtgtgcaatggggaagcaa
gctatgggaaatatagcatttaatcaattgtgccggatggactcattgctttaccttttg
gtgtatcctcaacggcctttactgacaacaaggacaatcgaactggtcggatatgacaag
cttggagcagggcagaatgcaactgttgctgtgatgagttatagtggctatgacatagag
gatgcaatagtcatgaacaaatcatctctagatcgtggttttggtcgctgtattgttgtg
aaaaagtatacagccatcaatcagaagtatgcaaatagtacatcggacaggatactaagg
ccagatagaacaggtcctggttctgaaaggatgcagattttggatgatgatggacttgct
gctcctggggaaattattaaaccgaatgatgtttatatcaataaagagtcccctttggaa
accagaggttcaatcatgtctccaacaggacaaacagatagtagatataggtccgccaga
caaacttacaagggtccggacggggagacctgtgtagtggatagagttgctctttgttct
gataagaatggcgatttatgtatcaagtttttaattcgccatactcgtagaccagagctt
ggtgataagttcagtagcagacatgggcagaaaggtgtctgtggaaccatagttcagcag
gaagattttccattttctgaacgtggcatttgtcctgatttgatcatgaatcctcatgga
tttccaagtcggatgacagtaggtaaaatgatcgagcttttagggggaaaggctggagtt
tcgtgtggtaggttccattatggaagtgcctttggagaaccaagtggccatgcagacaca
gttgaatctataagtgaaacacttgtgaagcatggctttagctacaatggcaaggacatg
atttattcaggtatcactggatgccctctgcaggcttacattttcatggggccaatttac
taccagaagttaaagcatatggtcctggataaaatgcatgctcgaggaagtggaccccgt
gtcatgctaactcgacaacccactgaagggagagcacggaatggaggacttcgagttgga
gaaatggaacgtgattgtttgattgcttatggagctagcatgttgatttttgagcgccta
atggtttccagtgatccttttgaagttcaggtttgtagagtgtgtggtctgttgggctat
tacaaccataagctgaaagctgggatttgttctacttgtaaaaatggcaataatatttct
agcatgaaactgccatatgcatgcaagctcctgatccaggaactccaatcaatgaatatt
gttcctcgcttgaaactggccgaggcatga
DBGET
integrated database retrieval system