Citrus x clementina (clementine): CICLE_v10000086mg
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Entry
CICLE_v10000086mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03030
DNA replication
cic03410
Base excision repair
cic03420
Nucleotide excision repair
cic03430
Mismatch repair
cic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CICLE_v10000086mg
03410 Base excision repair
CICLE_v10000086mg
03420 Nucleotide excision repair
CICLE_v10000086mg
03430 Mismatch repair
CICLE_v10000086mg
03440 Homologous recombination
CICLE_v10000086mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cic03032
]
CICLE_v10000086mg
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10000086mg
Enzymes [BR:
cic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CICLE_v10000086mg
DNA replication proteins [BR:
cic03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
CICLE_v10000086mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
CICLE_v10000086mg
MMR (mismatch excision repair)
DNA polymerase delta complex
CICLE_v10000086mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
18041330
NCBI-ProteinID:
XP_006432145
UniProt:
V4T1W7
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MVLKTGGNVSRHLPKSLQFQCFTRQTVSPSQQMNRSNGSARKRPPPTPKESWPNKQQATT
PTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQC
QSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGILDRGIQLDGLGMKSFMTY
ESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISHHPEGEFS
KMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVG
VDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIERSQTLGIAEFPILGRIR
NSRVRVKDTTFSSRQLGTRESKEVTVEGRVQFDLLQVMQRDYKLSSYSLNSVSAHFLSEQ
KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISF
LLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDF
ASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEEL
LAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSY
GRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS
GTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLV
TECLHKLLVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELA
ERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISK
PLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCS
HCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQK
DMAEAKLQLDRWNF
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgaaaactggcgggaacgtttctcgtcacttgcccaaatccctccaatttcag
tgcttcactcgtcagacagtcagtccaagccaacaaatgaaccgcagcaacggcagcgca
agaaaacggccaccgccgacgccgaaagaatcttggccaaataaacagcaagcaaccaca
ccgacaacaccggttatcgacgacgaattcctcgatgaggacgtgttcctcgacgaaacc
ctactgccggaggatgaagaatcccttattctccgcgacatcgagcagcgtcaggacttc
gcttctcgtctggccaagtgggcccgccctcccctatcgtctggctacgtgtcccaatgt
cagagcatcatgtttcagcaattggatattgattacgtaattggagatagtaacagagaa
ttgttgcctctttcttctgggtctgctgccatcattcgaatttttggagttacaagggaa
ggaatcctggatagaggcatacaacttgatggattgggtatgaagagcttcatgacatat
gaaagcaatgttctttttgctcttcgtttcatgatagattgcaacatcgttggtggcaat
tggattgaagtgccggttggaaaatacaggaagacagcgaagactttgtcctattgccag
ttggaatttgattgcctgtattcagatataattagccatcatcctgaaggtgaattttca
aaaatggctccatttcgcatattgagttttgatattgaatgtgcgggtcgtaaagggcat
tttccagagcctacccatgatcctgttatacaggtggcaaatctagttactttgcaagga
gaaaagcaaccatttattcgtaatgtcatgaccctcaaatcatgtgctccaatcgttggt
gtagatgtgatgtcttttgaaacagaaagggacgtcttgctagcttggagggattttatc
cgtgaagtggaccctgatgttatgattggatataatatctgcaagtttgatttgccctat
cttattgagagatctcaaactttgggaatagcagaatttcctatactgggtcgtatcaga
aacagcagggttcgagtcaaagatacaactttttcttcaagacaattaggaacgcgggaa
agtaaagaagttactgtggaagggagagttcaatttgatttgcttcaggtaatgcaacgg
gattataaattaagttcttattctttgaactctgtttctgcgcactttctttcggagcag
aaagaggatgtccaccattcaattatatctgaccttcagaatggaaatgcagaaactagg
aggcgacttgctgtatattgtttgaaggatgcttatctcccacagaggcttttggacaaa
ttgatgttcatttttaactatgttgagatggctcgtgtcactggagttcctatctctttc
cttctttcgagagggcagagcatcaaggtgctttctcaacttcttaggaaggctaagcag
aagaatcttgtaattccaaatgtgaaacaggctggatctgaacaaggaacatatgaaggg
gcaactgttttggaggccagggcggggttctatgagaagcctattgcaacattggatttt
gcttctttgtatccatcgattatgatggcgtataatttgtgttacagcactctggtgacg
cctgaagatgctcgcaaactcaatcttcctcctgaatgtgtgaacaaaactccatcgggt
gaaacatttgttaaatcaaatttgcagaagggaatacttcctgaaattcttgaagaacta
ttagctgcccgtaaaagagcaaaagcagatttgaaggaagcaaaggatcctcttgagaag
gctgttctagatggccgacagcttgcattgaagataagtgcaaattctgtatatggattt
acgggagctactgtgggtcagttaccctgtatagagatttcttccagcgttacaagctat
ggccgtcaaatgattgagcacactaaaaagcttgtggaagacaaatttacaacggttggg
ggctatgaacacaatgcagaggttatatatggggacacggattctgttatggtacaattt
ggtgtacctactgtagaagcagcaatgaagctggggagggaagctgctgattatattagt
ggaactttcatcaaacccatcaaactagagttcgagaaggtttactatccgtatctgttg
atcagcaagaagagatatgctggtttgtattggacaaaccctgaaaagtttgacaaaatg
gatacgaaaggcatagaaacagtacgaagagacaattgtttattggttaaaaaccttgta
actgagtgtcttcacaaattattggttgacagagacatccctggggctgttcagtatgtc
aagagtaccatttcagatcttctcatgaaccgcatggatttgtcacttttggtgattact
aagggtctgacaaagacaggagatgattatgaagtaaaagcagctcatgttgaacttgct
gagcgcatgcgcaagcgggatgctgccactgctccaaatgttggggatcgagtaccttat
gtcattataaaagctgctaaaggtgccaaggcttatgagaggtcagaggatcctatttat
gtgctagaaaataatataccaatagacactcattattatcttgagaaccagatcagcaag
cctcttttaagaatctttgagcccattttgaagaatgctagcaaggaacttctcagtgga
gatcacacaagatcaatttccatctctactccttcaaacagtggcataatgaaattcgcc
aagagacaactaagttgcattggttgcaaggccctgattagcaatggaactctctgctca
cactgcaagggaagagaagctgaactgtattgcaaaactgtttctcaagtacaagagcta
gaggtgctttttggtaggctgtggacacagtgccaagagtgccagggttctcttcatcag
gatgtgctctgcactagtcgggattgtccaatattctatcggaggaaaaaggctcaaaag
gacatggctgaagctaaactgcaactagaccggtggaacttctaa
DBGET
integrated database retrieval system
