Citrus x clementina (clementine): CICLE_v10000177mg
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Entry
CICLE_v10000177mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CICLE_v10000177mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10000177mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10000177mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CICLE_v10000177mg
Coactivators
SAGA/TFTC/STAGA complex
CICLE_v10000177mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
CICLE_v10000177mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
18041231
NCBI-ProteinID:
XP_006433616
UniProt:
V4TB80
LinkDB
All DBs
Position
Unknown
AA seq
954 aa
AA seq
DB search
MDPSIMKLLEEDEDESMHSGADVDAFQAALNRDIGGDVSTSQPSDSESALVQGNDSSNTL
SQPMAQWQNASQDENTNFHSQQGPESARLQEQHLQQMELKQHGSVAENQQQQQNESSVSE
EDNRNPLQQKQSQDDRQQGQAEEKTLSQISQTTGIQISEKNPVAMHVPERTQNQVGGPQY
PKMQKMSNQQAVGAEQPGNPMNRGKQVPFALLLPALVPHLDKDRAMQLHTLYGKLKKNEI
VKDVFVRHMRDIVGDQMLRLAVNKMQSQMGSHQFPSQSQASARQQQLRMPSASAAASQFS
DTHSFAQVNQKSNSPTDPIHGPASSAHVQVGSSYPIKENSAQKSRELEHQSASHGIHGSQ
ISSSTPSTVNQERERSSVVQGLNKQQQQHLHFPQTSFSMYGSGSNSYHPYSGTNVNNPGS
SLKPQPHDSAMRQITHHQSMGSTPLGGASQPMNVMNVPKFEKQNNMNDPGKVQGGSISQF
TSNSTLQQSSVPWQASANKEQSSGSLPSMAYVKPEPIDQGTDQPYKLHSSTPQGFSVAQV
EPGSTVPGTLKDEASEKQSPRMGFSASTSIVPSNSVSPSTTTLLDSNALSSRMPAVTSPA
GVNARTPPKKPSVSQKKPVEPPGSSPPMPSKKQKVSGAFSDQSIEQLNDVTAVSGVNLRE
EEEQLFSGTKEDSRVSEASRRVVQEEEERLILQKNPLQKKLAEIMVKCGLKNMSNDVERC
LSLCVEERMRGLLCNLIRLSKQRVDAEKIRHRTVITSDIRQQIMLMNRKAKEEWEKKQAE
AEKLRKVNEPDGDSGIDGEKEKDDGRIKSVKVNKEEDDKMRTTAANVAARAAVGGDDMFS
KWQLMAEQARQKREGGTDMASGSQAGKDTNRRPLTSGRNTKDNQDAEKRGQTTPSASGSG
RKFGKTQATVSQTKVARAITVKDVIAVLEREPQMSKSTLIYRLYEKVSSDASAE
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggacccttccataatgaagctcctcgaagaagacgaggacgagtctatgcattccggt
gctgacgtggatgcctttcaggctgctttaaatcgggatataggcggcgatgtgtccact
tctcagccatctgattcggagtccgcattggttcaaggaaacgacagcagtaataccttg
agtcagccaatggctcagtggcaaaatgctagtcaggatgaaaacacaaactttcatagt
caacaaggtccagaaagtgcacggctgcaagagcaacatttgcaacagatggagctaaag
caacatggatctgtcgctgagaatcagcagcaacagcagaatgagagttcagtctctgag
gaagacaatcgcaatcctttgcaacagaaacaatcccaagatgatcgccagcaagggcag
gccgaagaaaaaacacttagccagatttctcaaaccactggaatccagatttctgaaaag
aatcctgttgcaatgcatgtgccagagagaacacaaaatcaagttggtggacctcaatat
ccaaaaatgcaaaagatgagtaatcaacaggcagtaggtgcagagcagcctggtaaccct
atgaatcgtggtaaacaagtaccatttgccttgttgcttcctgccttggtaccacatcta
gataaggatagagccatgcagctccacacactatatggtaaactgaagaaaaacgaaatt
gttaaagatgtctttgtccgacacatgagggatattgttggtgaccagatgcttagattg
gcagtcaataaaatgcaatcacagatgggttcccatcagttcccctcacagtcccaagcc
tcagcacggcaacaacagttaaggatgccatctgctagtgctgctgcctcgcagtttagt
gatacccactcatttgcacaggttaatcagaagagcaactccccaacagatccaattcat
ggtcctgcttcatcagcccatgtgcaggttggttcaagctatccaattaaagaaaacagt
gctcaaaaatctcgagagctggagcaccaatcagcttctcatggaatacatggtagccaa
atatcttcttccactccgagcactgtcaatcaagaaagagagcgctcttcggttgtacaa
ggactgaacaagcagcaacaacagcatttgcactttccacaaacttccttttccatgtat
ggcagtggcagcaatagttatcatccgtactctgggacaaatgtgaataatccaggatca
tctctgaaaccacaacctcatgattcagcaatgaggcaaattacgcatcatcaaagtatg
ggatcaacacctttaggaggggcgagccaacccatgaatgtaatgaatgtgccaaagttt
gagaagcaaaataatatgaatgatccaggaaaagtgcagggtggttcaatttctcagttt
acaagcaattcaacattgcaacagagttctgttccttggcaagcttctgcaaataaagag
cagagttctggatctttgccatcaatggcatatgtaaagccagaaccaattgatcaggga
actgatcaaccgtacaaattgcattcctctaccccacaaggattttctgttgcacaggtt
gaaccaggcagtacagtaccaggaactttgaaggatgaagcttctgagaagcagtctcct
agaatgggtttttctgcatctactagtattgtgccctcaaattcagtttctccttcgaca
acaacactgctggattctaatgcattaagctctcggatgcctgctgtgacatctccagct
ggggttaatgcaaggacacctccaaaaaagccgtctgttagtcagaagaaaccagttgaa
cctcctggttcctcgccacccatgccaagtaagaagcaaaaagtatctggggccttttca
gatcaaagtattgaacaacttaatgatgttactgctgtcagtggagttaatctcagggaa
gaagaagaacaactgttttctgggaccaaggaggacagtcgagtatcagaagcatctcga
agggttgtgcaagaagaagaagaaaggcttattttacagaaaaatcccttgcagaaaaaa
ttggctgagatcatggtgaaatgtggcttgaagaatatgagcaatgatgtggagagatgc
ttgtccttgtgtgtcgaggagaggatgcgaggactcttatgtaatctaatcagattgtca
aagcagcgggttgatgcagagaaaattagacatcggaccgttattacctcagatattcgg
caacaaattatgcttatgaaccggaaagctaaagaagaatgggagaagaagcaggctgag
gctgaaaaactccgaaaagttaatgaacctgatggtgatagtggaattgatggtgagaag
gagaaagatgatggtcgtataaaatcagtgaaggtaaacaaagaggaggatgacaaaatg
agaacgacagctgcaaatgttgctgctcgcgctgctgttgggggagatgacatgttttcg
aaatggcaacttatggctgagcaagcccggcagaaacgtgagggaggaacggatatggca
tctggttctcaggcaggaaaagacaccaaccgcagacctctaacatctggacggaataca
aaggataatcaagatgcggagaaaagaggccaaaccactcctagtgcttctggttctggt
agaaaatttggaaagacccaagctacggtgtctcaaaccaaggtggctcgtgctattact
gttaaggatgtgattgccgtcctagaaagggaaccccagatgtccaagtcaactttgatt
taccgcttgtatgagaaagtcagttccgatgcttcagctgaataa
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integrated database retrieval system
