Citrus x clementina (clementine): CICLE_v10000290mg
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Entry
CICLE_v10000290mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K13174
THO complex subunit 5
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CICLE_v10000290mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10000290mg
03041 Spliceosome [BR:
cic03041
]
CICLE_v10000290mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CICLE_v10000290mg
Spliceosome [BR:
cic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CICLE_v10000290mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
Motif
Other DBs
NCBI-GeneID:
18042861
NCBI-ProteinID:
XP_006434752
UniProt:
V4T476
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MEDGEIEEEGMVVDVDGGGDAPLTNSPSKTQISAYEMLRDTKSSIEEIVSEMITIKSESK
PKSQLRELVTQMFINFVTLRQVNRTLLVEEDRVKAETERAKAPVDSTTLQLHNLMYEKSH
YVKAIKACKDFRSKYPDIDLVPEEEFHRDAPEKIKGSKLSNDISHDLMLKRLNYELHQRK
ELCKLHEKLEQHKKSLQEMIANRKKFLSSLPSHLKSLKKASLPIQSQLGVLHTKKIKQLN
SAELLPPPLYVIYSQFTAQKEAFGDNIDLEIVGSLKDAQAFARQQAIKDTGISTNVESSK
LEDDAPDEEDDGQRRRKRPKRVPSKESLDQAGVHQVHPLRIILHIYDDEASDPKSAKLIT
LKFEYLFKLNVVCVGIEASHEETEKDILCNLFPDDTGLELPHQSAKLSVGNTLVFDEKRT
SRPYKWAQHLAGIDFLPEVSPLLASRETSNSETVKSDAVVSGLALYRQQNRVQTVVQRIR
SRKKAELALVEQLDSLMKRKWPTLNCERVPWALHTPLCNLYSWSIVGPPPEQTSSLPTID
TEPAQEYLDVNMDGRSGTSKEDLESAREDGELPSLFQAASVGNDVKLTHSKGSNLDHSRQ
LALISKSIISPAAKARSQSFKKHDDDSDLLLDIDSELDEPAQIQTEVVNAASIHHSETNE
KSWVDCGVKEFTLVLNRTMDANKKSVNLEAKIKISTEYPLRPPLFAVSLENAAGVHEHGD
DYSEWFNELRAMEGEVNLHMVKMVPPDQQNYILAHQVRCLAMLFDYCVDAASPSSQKRKS
TYVLDVGLCKPVSGRLLARSFRGRDRRKMISWKDMECTPGYPY
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggcgagatagaagaggaaggaatggtggtagatgttgacggaggaggagac
gcaccgttaacaaactcgccgagcaagacacagatatcggcttacgaaatgctgagagac
accaaatcgtcgattgaagaaatcgtatcggagatgataacaatcaaaagcgaaagcaaa
ccaaaatctcaactaagagaactcgtcactcaaatgtttatcaatttcgtcactctccgc
caggtgaaccgtacgctattagtagaagaagaccgggtgaaagccgagacggaacgggcg
aaggcgccggtggattccacgactctgcagctgcataatttgatgtatgaaaagagtcat
tatgttaaagcaattaaagcgtgcaaggacttcaggtctaaatatcctgacattgatctc
gtgcccgaagaagaatttcatcgtgacgcaccagagaagattaaaggctccaaattgtct
aatgacatctcacatgatctcatgctcaagaggctcaattatgaattgcaccagcggaaa
gaactgtgcaagcttcatgagaagctagaacaacataagaaaagtttacaggagatgatt
gcaaatcggaaaaagttcttgtcgagtcttccttcacatcttaagtctctgaagaaagca
tcgttgccaatacagagccaattaggggttttgcacacgaagaaaataaagcaactcaac
tcagctgagttacttccaccacctctctatgtgatttactcacagtttacagcacagaag
gaagcatttggtgataatatagatctagagatagttggaagtttgaaagatgctcaagct
tttgcccgccaacaagcaattaaggacactggtatatctactaatgttgagagctccaag
ttagaagatgatgcaccagatgaggaggatgatggccagagaagaagaaagcggccaaag
agagttccaagcaaagagagtcttgaccaggcaggagtacatcaagttcatccacttaga
ataatccttcatatatatgatgatgaggcctccgatcccaaatctgcaaaactcatcacc
ttgaagtttgagtacttgttcaaattgaatgttgtatgtgttggaattgaagcgtcacat
gaagaaactgagaaagatatcttgtgcaatttatttcctgatgacactggtcttgagctt
cctcaccagtcagccaagctctctgttggtaataccctggtatttgatgaaaagagaact
tcgcgtccatacaagtgggcccagcatttggcaggaattgatttcttaccggaagtctca
ccattgcttgctagtcgtgaaacttctaatagtgagactgttaaaagtgatgcagttgta
tctggcctagcactatatcgccaacagaatagggtacagacagttgtgcaacgaattcgc
tctcggaaaaaagctgagctggctcttgtggaacagcttgattcacttatgaagcgtaaa
tggcctactttgaattgtgaacgagttccatgggctttgcataccccactatgcaatttg
tatagctggtctattgtaggccctccacctgaacaaacttcctctttgcccaccattgat
acagagccagctcaggaatatctagacgttaatatggatggaagatctggtacttctaaa
gaagacctagagagtgcaagggaagatggggagcttccttctctgtttcaagctgcatct
gttggaaatgatgttaaactaacacattcaaaagggtctaatttagaccattccaggcag
cttgctttaatttctaagagcattatttctcctgctgctaaggcaaggtctcaaagtttc
aaaaaacatgatgatgattcagatctcttgcttgacattgatagtgaactggatgaacct
gcacaaattcagacagaagtagtcaatgctgcttccattcatcactctgagacaaatgaa
aagtcatgggtggattgtggggttaaggaattcactcttgttttaaaccgaacaatggat
gcaaataagaagagtgtaaatttagaagctaagatcaagatcagtactgagtatcctctt
aggcctccgctttttgctgtgagtcttgagaacgctgctggagtacatgagcatggggat
gattattctgagtggttcaatgagcttcgtgccatggaaggagaggtcaatcttcacatg
gtaaagatggtacctcctgatcaacaaaattacatcttagctcatcaagtccgttgtctt
gcaatgttgtttgactattgcgtagatgcggcgtccccgtcttcccaaaagaggaaaagt
acttatgtgcttgatgttggtttatgtaagcctgttagtggtaggcttctcgccagatca
tttagaggaagggacaggaggaagatgatatcctggaaggatatggagtgcactcctggc
tatccgtactag
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integrated database retrieval system
