Citrus x clementina (clementine): CICLE_v10000301mg
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Entry
CICLE_v10000301mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CICLE_v10000301mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10000301mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CICLE_v10000301mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_Prp19
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
PQQ_3
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_WDR11_1st
Pep3_Vps18
Motif
Other DBs
NCBI-GeneID:
18043012
NCBI-ProteinID:
XP_006433650
UniProt:
V4T620
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MPIYRNSSIDWKPSPVVALATSADDSQVAAAREDGSLEIWLVSPGTSGWHCQLTVHGDPK
SRISSLVWCHAGKMGLPGGRLFSSSIDGSVSEWDLYDLKQKIVLQSIDFSIWQMAVAPSN
SSLMHAVTNSDHIGNGYLNDKSNDSDDHETSESENDSDSDELHEQSVVEDRRVALACDDG
CVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYR
ITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNAL
AAAPSHNRVFSTGSDGQVILYKASCESIGPNDGLSSSEVIKKWIYVGSVRAHTHDVRALT
VAVPISREDPLPEDKVKRSRGREKPIDFSYHKWAHLDVPMLISAGDDTKLFAYCANEFTK
FSPHEICPAPQRVPIHLVHNTIFSHTSLLLVQYSCRLDILSVRLENNVESRSSSGGHAST
SLLVQVKSKASRKIICSTISNSGMLFAYSDHVKPSLFELKKGKVGQGEWIINKRQLPRKL
QFAHSMIFSYDSSQLIIAGHDRRIYVVDVSSSELLHTFTPCREEHDREIQPSEPPITKMF
TSSDGQWLAAVNCFGDVYIFNLEIQRQHWFISRLEGASVTAAGFPPQNNNVLIITTSSNQ
VYVFDVEAKQLGEWSMQHTFVLPRRYQEFPGEVIGLSFSPSPSSSSVIIYSARAMCVIDF
GRPVDPDDETDMVSGQGSALRKIASTPINGRLKRKLRDCQTESNKLHGRKNFEFFAFRDP
VLFIGHLSKSSMLIIDKPWLEVVKTFDAPVHRHIYGT
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgcccatttaccggaacagctcaatcgactggaagccgtctccggtagtagccctagcc
accagcgccgacgattcacaggtagccgcggctcgcgaagacggctcacttgagatttgg
ctagtatctccaggcacctccggctggcactgtcagctgaccgttcatggagatcctaag
tcaagaatttcatcgcttgtttggtgtcatgctggtaaaatggggttgcctggtggacgg
ttgttctcttctagtattgatgggtcggtttcagagtgggatctttatgatttgaaacag
aagattgtactgcagtcaattgatttctcaatctggcagatggctgttgcaccctctaat
agttcgctaatgcatgcagtgactaactcagaccatattggaaatggatatttaaatgat
aaatctaatgatagtgatgatcacgaaaccagtgagagtgaaaatgattctgactcagat
gagctacatgagcaatctgttgttgaggacagacgtgtagcccttgcttgtgatgatggt
tgtgtgaggatatacaggatcactgattcagatgagttgatttaccatagatcattgcct
agggtcagtgggcgtgttttaagtgtgacctggagtgctgatggtaatatgttatattca
gggagcagtgatgggtatattagaagttgggatgctaaattgggttatgaaatatatagg
attacggtcgggctgggaggcttgggcagtggacctgaactttgcatatggtcattactt
tccctgaggtgtgggacccttgttagtgcagacagtactggcagcgttcagttttgggac
agccggcatggaacacttttgcaggctcattcttttcacaaaggagatgtgaatgctctg
gctgcagctcctagtcataacagggtgttctctactggctctgatggtcaggttattcta
tataaggcttcatgtgagtcaattgggccaaatgatggcctgtcttcctctgaagtaatt
aagaaatggatatatgttggctctgtaagagctcatacacatgatgtcagggctttgacg
gtggctgtgccgatcagtcgtgaagatcctttgccagaagataaggtaaaaagaagtcgt
ggtagggagaagcccattgattttagctaccataagtgggctcacttagatgttcccatg
cttatctctgccggtgatgacactaagctctttgcctactgtgctaacgagttcaccaag
ttctctccacatgaaatctgccctgcaccccagagagtacccatccacctggtgcataat
acgatattcagtcatacatctttacttttagttcagtattcttgtcggttagatatcctc
tctgttcgtctagagaataatgtagaatctcgctcctcttctgggggccatgcaagtaca
agtttgttggtccaagtaaagagtaaggcatcccggaaaattatctgcagcaccatttct
aactctgggatgctttttgcatattcagaccatgttaaacccagcctttttgaattgaag
aagggtaaagttggccagggtgaatggattatcaataaaagacaacttccgcggaaacta
cagtttgcgcattccatgatttttagttatgattcttcacaattgattatagcagggcat
gatagaaggatatatgttgtggatgtcagcagctctgagctactacatactttcacacct
tgtcgtgaggagcatgatagggaaatacaacctagtgagcctcctataacaaaaatgttt
acaagttctgatgggcagtggctggctgccgtgaactgttttggggatgtgtatatattc
aacctggagattcaaaggcaacactggttcatatcaagattggaaggtgcttctgtcaca
gctgctggttttcctcctcagaataacaatgttcttataattaccacctcttcaaaccag
gtctatgtatttgatgtggaggctaaacagctaggagaatggtcaatgcagcatacattt
gttctgccgaggagatatcaagaatttcctggggaggtgattgggctctctttctcacct
tcccctagctcatcatctgttatcatttatagtgccagggcaatgtgtgtgattgacttt
gggagaccagtggatccagatgatgagactgacatggtaagtggtcaggggtctgctttg
aggaagatagctagtacacccatcaatggtaggctgaagcggaagttgagagactgccaa
acagagtctaataaactgcatggtagaaaaaattttgaattttttgctttcagagatcct
gttttatttattggacacctttccaaaagttccatgttgatcattgacaaaccatggttg
gaagtggttaaaactttcgatgcccctgttcacagacatatttatggaacataa
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