KEGG   Citrus x clementina (clementine): CICLE_v10000335mg
Entry
CICLE_v10000335mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K18468  vacuolar protein sorting-associated protein 35
Organism
cic  Citrus x clementina (clementine)
Pathway
cic04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cic00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    CICLE_v10000335mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cic04131]
    CICLE_v10000335mg
Membrane trafficking [BR:cic04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Retromer subcomplex
    CICLE_v10000335mg
SSDB
Motif
Pfam: Vps35
Other DBs
NCBI-GeneID: 18040505
NCBI-ProteinID: XP_006435214
UniProt: V4V8H5
LinkDB
Position
Unknown
AA seq 790 aa
MMLSGDEDEEKWLAEGIAGVQHNAFYMHRALDSNNLREALKYSAQMLSELRTSKLSPHKY
YELYMRAFDELRKLEMFFKDESRHGVSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKEVLKDLVEMCRGVQHPIRGLFLRSYLAQVSRDKLPDIGSEYERDAETVMDAVEFVL
QNFTEMNKLWVRMQHQGPGRVREKREKERNELRDLVGKNLHVLSQIEGVDLEMYKENVLP
RVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPTVDIKTVLSRLMD
RLSNYAVSSADVLPEFLQVEAFAKLSNAIGKVIDAQVDMPIVGAISLYVSLLTFTLRVHP
DRLDYVDQVLGACVKKLSSAPKLEDSRATKQVVALLSAPLDKYNDILTALTLSNYPRVMD
HLDDGTNKVMAMVIIQSIMKNSTCISTAEKVEVLFELIKGLIKDLDGAAQDELDEEDFKE
EQNSVARLIHMLYNDDSEEMLKIICTVRKHIMTGGPKRLPFTVPPLVFSALRLVRQLQNQ
DGDVAGEEEPATPKKIFQLLNQTIETLLYVPSPEMALRLYLQCAEAANDCDLEPVAYEFF
TQAFMLYEEEIADSKAQVTAIHLIIGTLQRISVFGIENRDTLTHKATGYSARLLKKPDQC
RAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMANVARGSSGPVVLFVEILN
KYLYFFEKGNTQITASAIQSLIELITSEMQSESTTLDPAANAFFASTKRYIEFQKKKGGA
MGEKYDPINV
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgatgttaagcggagacgaagacgaagagaaatggctggcggaagggatcgccggcgtc
caacacaatgccttttacatgcatcgcgctctggactccaacaatttgagggaagctctt
aaatactcggctcagatgctctccgagcttcgaacttccaaactctccccgcacaaatac
tacgaactctacatgcgagcttttgatgaattaaggaaactagagatgtttttcaaagac
gaaagcaggcacggtgtgtcaatcattgatctttatgagcttgttcaacacgctggcaat
attttgcctagattgtatctgctatgcacagtaggttctgtttacattaaatctaaagag
gctcctgcaaaggaagttcttaaagatcttgttgaaatgtgtcgcggtgttcagcatccg
atacgtggattattcttaagaagttaccttgctcaagtcagcagagataagttgcctgat
attggttctgagtatgaaagagatgctgagactgtgatggacgctgtagaatttgtgctg
cagaattttactgagatgaataagctttgggttcgaatgcaacatcagggacctggacgc
gtaagagagaagcgggaaaaggagaggaatgagcttcgtgatcttgtaggaaaaaacctt
catgttctcagtcagattgaaggcgttgaccttgagatgtacaaagaaaatgttcttcct
agagtgttagagcaggttgtaaactgtaaagatgaacttgcccaatattatctgatggat
tgcattattcaggtctttccagatgagtatcacttgcaaacccttgagacactattgggc
gcctgcccccagcttcagccaacagttgacatcaagacagtgctatctcgactaatggat
aggttgtcaaattatgctgtttcgagtgcagatgtactacctgaatttcttcaagtcgaa
gctttcgctaaactgagcaatgccattgggaaggtgatagatgcacaggttgacatgcct
attgttggagctatatctttgtatgtctctcttcttacgtttacactccgagttcatcct
gatcggctggattatgtcgatcaagtgctgggtgcatgtgttaagaagctatctagtgcg
ccaaagcttgaagacagtagggcaaccaaacaagttgttgcacttttaagtgctccattg
gataaatacaatgatattctcactgccttgacactttctaattatcccagagttatggat
caccttgatgatggaacaaataaagtgatggcaatggttattattcaaagtataatgaaa
aacagcacttgcatatcaactgcagaaaaggttgaggtgttgtttgaactaataaaaggg
ctcatcaaagatttggatggagctgctcaggatgagcttgacgaggaggatttcaaggag
gaacaaaattctgttgctcgtctcatacacatgctttacaatgatgactcggaggaaatg
ttgaagataatatgtactgtaaggaagcatattatgaccggaggaccgaaacggctaccg
tttaccgttcctcctcttgtcttttctgctctcaggttggttaggcaattgcagaatcag
gatggagatgtagctggagaagaagaacctgcaacaccgaagaaaatatttcagctcttg
aatcagactattgaaactcttttatatgttccatcacctgaaatggcattgagattatac
ctgcaatgtgctgaggctgctaatgactgtgatctcgagcctgttgcctatgaatttttc
actcaagcatttatgttatatgaagaagaaattgcggactccaaagcccaggtgacagca
atacatctgataattggaactctacagaggataagtgtatttggtattgagaatagggat
actttgacacacaaggccactgggtattctgcaaggcttttaaagaaacccgatcagtgc
cgagcagtttatgcatgctcacatctcttttgggttgatgatcaagatggtattaaggac
ggagaaagggtcctcctatgcctaaagcgtgccttgaggattgcgaatgctgctcaacaa
atggccaatgttgcacggggtagcagcgggcctgtagttctctttgttgaaatacttaac
aagtacctctatttttttgagaaaggaaacacacagatcacagcttcagcaatacaaagc
ctcattgagttaatcactagtgagatgcagagtgagtccacaaccctagatcctgctgct
aatgctttctttgcgagcacgaaacggtacattgaattccagaaaaagaaaggtggtgca
atgggtgagaaatatgatcccatcaatgtgtga

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