Citrus x clementina (clementine): CICLE_v10000335mg
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Entry
CICLE_v10000335mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
CICLE_v10000335mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cic04131
]
CICLE_v10000335mg
Membrane trafficking [BR:
cic04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
CICLE_v10000335mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
18040505
NCBI-ProteinID:
XP_006435214
UniProt:
V4V8H5
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MMLSGDEDEEKWLAEGIAGVQHNAFYMHRALDSNNLREALKYSAQMLSELRTSKLSPHKY
YELYMRAFDELRKLEMFFKDESRHGVSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKEVLKDLVEMCRGVQHPIRGLFLRSYLAQVSRDKLPDIGSEYERDAETVMDAVEFVL
QNFTEMNKLWVRMQHQGPGRVREKREKERNELRDLVGKNLHVLSQIEGVDLEMYKENVLP
RVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPTVDIKTVLSRLMD
RLSNYAVSSADVLPEFLQVEAFAKLSNAIGKVIDAQVDMPIVGAISLYVSLLTFTLRVHP
DRLDYVDQVLGACVKKLSSAPKLEDSRATKQVVALLSAPLDKYNDILTALTLSNYPRVMD
HLDDGTNKVMAMVIIQSIMKNSTCISTAEKVEVLFELIKGLIKDLDGAAQDELDEEDFKE
EQNSVARLIHMLYNDDSEEMLKIICTVRKHIMTGGPKRLPFTVPPLVFSALRLVRQLQNQ
DGDVAGEEEPATPKKIFQLLNQTIETLLYVPSPEMALRLYLQCAEAANDCDLEPVAYEFF
TQAFMLYEEEIADSKAQVTAIHLIIGTLQRISVFGIENRDTLTHKATGYSARLLKKPDQC
RAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMANVARGSSGPVVLFVEILN
KYLYFFEKGNTQITASAIQSLIELITSEMQSESTTLDPAANAFFASTKRYIEFQKKKGGA
MGEKYDPINV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatgttaagcggagacgaagacgaagagaaatggctggcggaagggatcgccggcgtc
caacacaatgccttttacatgcatcgcgctctggactccaacaatttgagggaagctctt
aaatactcggctcagatgctctccgagcttcgaacttccaaactctccccgcacaaatac
tacgaactctacatgcgagcttttgatgaattaaggaaactagagatgtttttcaaagac
gaaagcaggcacggtgtgtcaatcattgatctttatgagcttgttcaacacgctggcaat
attttgcctagattgtatctgctatgcacagtaggttctgtttacattaaatctaaagag
gctcctgcaaaggaagttcttaaagatcttgttgaaatgtgtcgcggtgttcagcatccg
atacgtggattattcttaagaagttaccttgctcaagtcagcagagataagttgcctgat
attggttctgagtatgaaagagatgctgagactgtgatggacgctgtagaatttgtgctg
cagaattttactgagatgaataagctttgggttcgaatgcaacatcagggacctggacgc
gtaagagagaagcgggaaaaggagaggaatgagcttcgtgatcttgtaggaaaaaacctt
catgttctcagtcagattgaaggcgttgaccttgagatgtacaaagaaaatgttcttcct
agagtgttagagcaggttgtaaactgtaaagatgaacttgcccaatattatctgatggat
tgcattattcaggtctttccagatgagtatcacttgcaaacccttgagacactattgggc
gcctgcccccagcttcagccaacagttgacatcaagacagtgctatctcgactaatggat
aggttgtcaaattatgctgtttcgagtgcagatgtactacctgaatttcttcaagtcgaa
gctttcgctaaactgagcaatgccattgggaaggtgatagatgcacaggttgacatgcct
attgttggagctatatctttgtatgtctctcttcttacgtttacactccgagttcatcct
gatcggctggattatgtcgatcaagtgctgggtgcatgtgttaagaagctatctagtgcg
ccaaagcttgaagacagtagggcaaccaaacaagttgttgcacttttaagtgctccattg
gataaatacaatgatattctcactgccttgacactttctaattatcccagagttatggat
caccttgatgatggaacaaataaagtgatggcaatggttattattcaaagtataatgaaa
aacagcacttgcatatcaactgcagaaaaggttgaggtgttgtttgaactaataaaaggg
ctcatcaaagatttggatggagctgctcaggatgagcttgacgaggaggatttcaaggag
gaacaaaattctgttgctcgtctcatacacatgctttacaatgatgactcggaggaaatg
ttgaagataatatgtactgtaaggaagcatattatgaccggaggaccgaaacggctaccg
tttaccgttcctcctcttgtcttttctgctctcaggttggttaggcaattgcagaatcag
gatggagatgtagctggagaagaagaacctgcaacaccgaagaaaatatttcagctcttg
aatcagactattgaaactcttttatatgttccatcacctgaaatggcattgagattatac
ctgcaatgtgctgaggctgctaatgactgtgatctcgagcctgttgcctatgaatttttc
actcaagcatttatgttatatgaagaagaaattgcggactccaaagcccaggtgacagca
atacatctgataattggaactctacagaggataagtgtatttggtattgagaatagggat
actttgacacacaaggccactgggtattctgcaaggcttttaaagaaacccgatcagtgc
cgagcagtttatgcatgctcacatctcttttgggttgatgatcaagatggtattaaggac
ggagaaagggtcctcctatgcctaaagcgtgccttgaggattgcgaatgctgctcaacaa
atggccaatgttgcacggggtagcagcgggcctgtagttctctttgttgaaatacttaac
aagtacctctatttttttgagaaaggaaacacacagatcacagcttcagcaatacaaagc
ctcattgagttaatcactagtgagatgcagagtgagtccacaaccctagatcctgctgct
aatgctttctttgcgagcacgaaacggtacattgaattccagaaaaagaaaggtggtgca
atgggtgagaaatatgatcccatcaatgtgtga
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